Construct: ORF ccsbBroadEn_06117

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001808.1_s300c1, BRDN0000457160
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DPP6 (1804)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001039350.3 99.7% 99.7% (many diffs)
2 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001364497.2 98.5% 97.1% (many diffs)
3 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001364498.2 98.5% 97.1% (many diffs)
4 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001364499.2 98.5% 97.1% (many diffs)
5 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001364500.2 98.5% 97.1% (many diffs)
6 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001936.5 98% 97.1% (many diffs)
7 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001290252.2 92.5% 91.5% (many diffs)
8 human 1804 DPP6 dipeptidyl peptidase like 6 NM_130797.4 91.1% 90.4% (many diffs)
9 human 1804 DPP6 dipeptidyl peptidase like 6 XM_017011812.2 81.7% 81.6% (many diffs)
10 human 1804 DPP6 dipeptidyl peptidase like 6 NR_157196.2 52.2% (many diffs)
11 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001364501.1 51.3% 47.4% (many diffs)
12 human 1804 DPP6 dipeptidyl peptidase like 6 NR_157195.1 47.9% (many diffs)
13 human 1804 DPP6 dipeptidyl peptidase like 6 NM_001364502.2 17.1% 16.3% (many diffs)
14 mouse 13483 Dpp6 dipeptidylpeptidase 6 NM_001198886.1 85.1% 92.7% (many diffs)
15 mouse 13483 Dpp6 dipeptidylpeptidase 6 NM_010075.2 84.2% 90.3% (many diffs)
16 mouse 13483 Dpp6 dipeptidylpeptidase 6 NM_001136060.2 83.9% 90.2% (many diffs)
17 mouse 13483 Dpp6 dipeptidylpeptidase 6 NM_207282.3 78.5% 83.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2472
ORF length:
2403
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAGGAAAAG GCCATGATCA AGACCGCTAA GATGCAGGGG AACGTGATGG
121AGCTGGTGGG GAGTAACCCT CCGCAGAGGA ATTGGAAAGG AATAGCAATT GCACTGCTTG
181TCATTCTGGT CATCTGCTCT TTGATCGTCA CCTCGGTCAT ACTTCTGACA CCAGCGGAAG
241ATAATAGTCT GTCTCAAAAG AAGAAGGTCA CTGTAGAAGA TCTCTTCAGT GAAGACTTCA
301AAATTCATGA CCCCGAGGCT AAGTGGATAA GTGATACAGA ATTCATCTAC AGAGAACAGA
361AAGGAACAGT GAGACTGTGG AATGTTGAAA CAAATACTTC TACTGTCTTA ATAGAAGGCA
421AAAAAATTGA ATCATTAAGA GCCATCAGAT ATGAAATATC TCCAGATAGA GAGTATGCAC
481TTTTTTCATA CAATGTGGAA CCCATATATC AACACTCGTA TACTGGATAT TATGTCCTGA
541GCAAAATTCC TCATGGGGAT CCTCAAAGTC TGGACCCACC AGAAGTCAGC AATGCAAAGC
601TTCAGTATGC AGGATGGGGC CCTAAAGGCC AACAGCTGAT ATTTATTTTT GAAAACAATA
661TCTACTACTG TGCACATGTC GGGAAACAGG CCATCCGTGT GGTCTCCACT GGCAAGGAAG
721GTGTGATTTA CAATGGCCTC AGTGACTGGC TGTATGAAGA GGAGATTTTG AAGACACACA
781TCGCACACTG GTGGTCTCCG GATGGCACGA GACTCGCCTA CGCCGCCATC AATGATTCCC
841GTGTCCCCAT CATGGAGCTC CCAACTTACA CCGGCTCCAT CTACCCCACC GTGAAGCCCT
901ACCACTATCC CAAGGCTGGA AGTGAGAACC CCAGCATTTC CCTACACGTT ATTGGCTTAA
961ATGGACCCAC CCATGATCTG GAGATGATGC CGCCTGATGA TCCACGGATG AGGGAGTACT
1021ACATCACCAT GGTGAAGTGG GCCACCAGCA CCAAGGTCGC CGTGACCTGG CTGAACCGGG
1081CGCAGAACGT GTCCATCCTC ACCCTCTGCG ACGCCACCAC GGGGGTCTGC ACGAAGAAAC
1141ACGAGGATGA AAGTGAGGCC TGGCTCCACA GACAGAATGA AGAACCTGTG TTCTCCAAGG
1201ATGGCCGAAA GTTTTTCTTC ATCAGAGCCA TCCCCCAGGG AGGACGAGGG AAATTCTATC
1261ACATCACGGT GTCCTCGTCC CAGCCCAACA GCAGCAACGA CAACATCCAG TCCATCACCT
1321CCGGGGACTG GGACGTGACC AAGATCCTAG CCTACGATGA GAAGGGGAAT AAGATCTACT
1381TCCTGAGCAC GGAGGACCTG CCTCGGAGAC GACAACTCTA CAGTGCCAAC ACGGTGGGCA
1441ACTTCAACAG GCAGTGCCTC TCCTGTGACC TGGTTGAGAA CTGCACCTAC TTCAGCGCTT
1501CCTTCAGCCA TAGCATGGAC TTCTTCCTGC TCAAGTGCGA AGGTCCTGGT GTTCCTATGG
1561TGACGGTGCA CAACACAACA GATAAGAAAA AAATGTTTGA CCTAGAAACA AATGAACATG
1621TCAAGAAGGC CATAAATGAC CGACAGATGC CTAAAGTGGA ATACAGGGAC ATTGAGATTG
1681ATGATTACAA CCTGCCCATG CAGATACTGA AGCCAGCAAC CTTCACCGAC ACCACCCACT
1741ACCCTCTGCT CCTGGTGGTG GATGGCACCC CGGGCAGCCA GAGTGTAGCT GAGAAGTTCG
1801AGGTGAGCTG GGAGACGGTG ATGGTGAGCA GCCACGGCGC GGTGGTGGTA AAGTGTGAAG
1861GCCGTGGCAG CGGCTTCCGA GGGACCAAGC TCCTGCACGA AGTGAGGCGG CGGCTGGGCT
1921TGCTGGAGGA GAAGGACCAG ATGGAGGCCG TGCGGACGAT GCTGAAGGAG CAGTACATTG
1981ACAGGACGCG CGTGGCCGTG TTTGGGAAGG ATTACGGTGG CTACCTGAGC ACCTACATCC
2041TCCCAGCAAA GGGAGAAAAT CAAGGCCAGA CATTCACCTG CGGCTCTGCT CTCTCTCCAA
2101TAACAGACTT CAAACTCTAT GCCTCTGCGT TTTCCGAGAG GTACTTGGGC CTCCATGGAC
2161TTGACAACAG AGCATACGAG ATGACCAAGG TAGCCCATCG AGTCTCCGCG CTGGAAGAAC
2221AGCAGTTCCT GATCATTCAT CCCACTGCCG ATGAAAAAAT TCATTTCCAG CACACAGCAG
2281AACTCATTAC ACAACTAATT AGGGGAAAGG CTAATTACAG CTTACAGATT TACCCGGACG
2341AAAGCCATTA CTTTACCAGC TCCAGCCTCA AACAGCATCT GTACCGGTCC ATCATCAACT
2401TCTTCGTGGA ATGCTTCAGG ATCCAGGACA AACTGCTGAC AGTCACAGCG AAAGAGGACG
2461AGGAGGAGGA CTTGCCAACT TTCTTGTACA AAGTTGGcat tataagaaag cattgcttat
2521caatttgttg caacgaac

Download FASTA (ORF) (Full)