Construct: ORF ccsbBroadEn_06619

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017556.1_s300c1, BRDN0000389069
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NCF2 (4688)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4688 NCF2 neutrophil cytosolic factor 2 NM_000433.3 99.8% 99.6% 542A>G;606G>A;1167C>A
2 human 4688 NCF2 neutrophil cytosolic factor 2 NM_001127651.3 99.8% 99.6% 542A>G;606G>A;1167C>A
3 human 4688 NCF2 neutrophil cytosolic factor 2 XM_011509580.1 99.8% 99.6% 542A>G;606G>A;1167C>A
4 human 4688 NCF2 neutrophil cytosolic factor 2 XM_011509581.1 99.8% 99.6% 542A>G;606G>A;1167C>A
5 human 4688 NCF2 neutrophil cytosolic factor 2 XM_005245207.1 93% 92.9% 500_501ins108;1059C>A
6 human 4688 NCF2 neutrophil cytosolic factor 2 NM_001190794.1 91.2% 91% (many diffs)
7 human 4688 NCF2 neutrophil cytosolic factor 2 NM_001190789.1 84.5% 84.4% 365_366ins243;924C>A
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1644
ORF length:
1578
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC CCTGGTGGAG GCCATCAGCC TCTGGAATGA AGGGGTGCTG GCAGCGGACA
121AGAAGGACTG GAAGGGAGCC CTGGATGCCT TCAGTGCCGT CCAGGACCCC CACTCCCGGA
181TTTGCTTCAA CATTGGCTGC ATGTACACTA TCCTGAAGAA CATGACTGAA GCAGAGAAGG
241CCTTTACCAG AAGCATTAAC CGAGACAAGC ACTTGGCAGT GGCTTACTTC CAACGAGGGA
301TGCTCTACTA CCAGACAGAG AAATATGATT TGGCTATCAA AGACCTTAAA GAAGCCTTGA
361TTCAGCTTCG AGGGAACCAG CTGATAGACT ATAAGATCCT GGGGCTCCAG TTCAAGCTGT
421TTGCCTGTGA GGTGTTATAT AACATTGCTT TCATGTATGC CAAGAAGGAG GAATGGAAAA
481AAGCTGAAGA ACAGTTAGCA TTGGCCACGA GCATGAAGTC TGAGCCCAGA CATTCCAAAA
541TCGACAAGGC GATGGAGTGT GTCTGGAAGC AGAAGCTATA TGAGCCAGTG GTGATCCCTG
601TGGGCAGGCT GTTTCGACCA AATGAGAGAC AAGTGGCTCA GCTGGCCAAG AAGGATTACC
661TAGGCAAGGC AACGGTCGTG GCATCTGTGG TGGATCAAGA CAGTTTCTCT GGGTTTGCCC
721CTCTGCAACC ACAGGCAGCT GAGCCTCCAC CCAGACCGAA AACCCCAGAG ATCTTCAGGG
781CTCTGGAAGG GGAGGCTCAC CGTGTGCTAT TTGGGTTTGT GCCTGAGACA AAAGAAGAGC
841TCCAGGTCAT GCCAGGGAAC ATTGTCTTTG TCTTGAAGAA GGGCAATGAT AACTGGGCCA
901CGGTCATGTT CAACGGGCAG AAGGGGCTTG TTCCCTGCAA CTACCTTGAA CCAGTTGAGC
961TGCGGATCCA CCCTCAGCAG CAGCCCCAGG AGGAAAGCTC TCCGCAGTCC GACATCCCAG
1021CTCCTCCTAG TTCCAAAGCC CCTGGAAGAC CCCAGCTGTC ACCAGGCCAG AAACAAAAAG
1081AAGAGCCTAA GGAAGTGAAG CTCAGTGTTC CCATGCCCTA CACACTCAAG GTGCACTACA
1141AGTACACGGT AGTCATGAAG ACTCAGCCCG GGCTCCCCTA CAGCCAGGTC CGGGACATGG
1201TGTCTAAGAA ACTGGAGCTC CGGCTGGAAC AAACTAAGCT GAGCTATCGG CCTCGGGACA
1261GCAATGAGCT GGTGCCCCTT TCAGAAGACA GCATGAAGGA TGCCTGGGGC CAGGTGAAAA
1321ACTACTGCCT GACTCTGTGG TGTGAGAACA CAGTGGGTGA CCAAGGCTTT CCAGATGAAC
1381CCAAGGAAAG TGAAAAAGCT GATGCTAATA ACCAGACAAC AGAACCTCAG CTTAAGAAAG
1441GCAGCCAAGT GGAGGCACTC TTCAGTTATG AGGCTACCCA ACCAGAGGAC CTGGAGTTTC
1501AGGAAGGGGA TATAATCCTG GTGTTATCAA AGGTGAATGA AGAATGGCTG GAAGGGGAGT
1561GCAAAGGGAA GGTGGGCATT TTCCCCAAAG TTTTTGTTGA AGACTGCGCA ACTACAGATT
1621TGGAAAGCAC TCGGAGAGAA GTCTACCCAA CTTTCTTGTA CAAAGTtggc attataagaa
1681agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)