Construct: ORF ccsbBroadEn_06761

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015859.1_s300c1, BRDN0000396745
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PPP3CC (5533)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5533 PPP3CC protein phosphatase 3 catal... NM_005605.4 99.9% 100% 1524G>A
2 human 5533 PPP3CC protein phosphatase 3 catal... NM_001243974.1 98.2% 98.2% 1139_1165del;1551G>A
3 human 5533 PPP3CC protein phosphatase 3 catal... NM_001243975.1 97.9% 98% 1319_1320ins30;1494G>A
4 human 5533 PPP3CC protein phosphatase 3 catal... XM_017013611.2 79% 76% (many diffs)
5 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745555.2 65.1% (many diffs)
6 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745556.2 56.2% (many diffs)
7 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745553.2 55.9% (many diffs)
8 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745558.2 53.7% (many diffs)
9 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745554.2 51.2% (many diffs)
10 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745557.2 49.3% (many diffs)
11 human 5533 PPP3CC protein phosphatase 3 catal... XR_001745559.2 48.7% (many diffs)
12 mouse 19057 Ppp3cc protein phosphatase 3, cata... NM_008915.3 85.2% 86.3% (many diffs)
13 mouse 19057 Ppp3cc protein phosphatase 3, cata... NM_001304991.1 84.3% 84.8% (many diffs)
14 mouse 19057 Ppp3cc protein phosphatase 3, cata... XM_006518714.3 83.7% 85.1% (many diffs)
15 mouse 19057 Ppp3cc protein phosphatase 3, cata... XM_006518715.3 78.8% 75.6% (many diffs)
16 mouse 19057 Ppp3cc protein phosphatase 3, cata... XM_017315922.1 67.9% 68.2% (many diffs)
17 mouse 19057 Ppp3cc protein phosphatase 3, cata... NM_001304992.1 56.3% 56.6% (many diffs)
18 mouse 19057 Ppp3cc protein phosphatase 3, cata... XM_017315923.1 56.3% 56.6% (many diffs)
19 mouse 19057 Ppp3cc protein phosphatase 3, cata... XM_017315924.1 51.6% 50% (many diffs)
20 mouse 19057 Ppp3cc protein phosphatase 3, cata... XM_017315925.1 51.6% 50% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1602
ORF length:
1536
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC CGGGAGGCGC TTCCACCTCT CCACCACCGA CCGCGTCATC AAAGCTGTCC
121CCTTTCCTCC AACCCAACGG CTTACTTTCA AGGAAGTATT TGAGAATGGG AAACCTAAAG
181TTGATGTTTT AAAAAACCAT TTGGTAAAGG AAGGACGACT GGAAGAGGAA GTAGCCTTAA
241AGATAATCAA TGATGGGGCT GCCATCCTGA GGCAAGAGAA GACTATGATA GAAGTAGATG
301CTCCAATCAC AGTATGTGGT GATATTCATG GACAATTCTT TGACCTAATG AAGTTATTTG
361AAGTTGGAGG ATCACCTAGT AACACACGCT ACCTCTTTCT GGGTGACTAT GTGGACAGAG
421GCTATTTCAG TATAGAGTGT GTGCTGTATT TATGGAGTTT AAAGATTAAT CATCCCAAAA
481CATTGTTTCT GCTTCGGGGA AATCATGAAT GCAGGCATCT TACAGACTAT TTCACCTTCA
541AACAGGAATG TCGAATCAAA TATTCGGAAC AGGTGTATGA TGCCTGTATG GAGACATTTG
601ACTGTCTTCC TCTTGCTGCC CTCTTAAACC AGCAGTTTCT CTGTGTACAT GGAGGAATGT
661CACCTGAAAT TACTTCTTTA GATGACATTA GGAAATTAGA CAGGTTTACG GAACCTCCCG
721CCTTTGGACC TGTGTGTGAC CTGCTTTGGT CTGATCCCTC AGAGGATTAT GGCAATGAGA
781AGACCTTGGA GCACTATACC CACAACACTG TCCGAGGGTG CTCTTATTTC TACAGTTACC
841CTGCAGTTTG TGAATTTTTG CAGAACAATA ATTTACTATC AATTATCAGA GCCCATGAAG
901CCCAAGATGC TGGGTATCGA ATGTACAGGA AGAGCCAAGC CACAGGCTTT CCATCACTTA
961TTACAATTTT CTCTGCCCCC AATTACCTAG ATGTCTATAA CAATAAAGCT GCTGTGTTGA
1021AATATGAAAA CAATGTCATG AATATCAGGC AGTTTAACTG TTCTCCACAC CCCTACTGGC
1081TTCCAAACTT TATGGATGTT TTCACATGGT CTTTGCCTTT TGTTGGGGAA AAAGTCACAG
1141AGATGCTGGT AAATGTGCTC AACATATGCT CTGATGACGA ACTGATTTCT GATGATGAAG
1201CAGAAGGAAG CACTACAGTT CGTAAGGAGA TCATCAGGAA TAAGATCAGA GCCATTGGGA
1261AGATGGCACG GGTCTTTTCA ATTCTTCGGC AAGAAAGTGA GAGTGTGCTG ACTCTCAAGG
1321GCCTGACTCC CACAGGCACA CTCCCTCTGG GCGTCCTCTC AGGAGGCAAG CAGACTATCG
1381AGACAGCCAC AGTAGAAGCG GTAGAGGCCC GGGAAGCCAT CAGAGGGTTC TCGCTTCAGC
1441ACAAGATCCG GAGTTTTGAA GAAGCGCGAG GTCTGGACCG AATTAATGAG CGAATGCCAC
1501CCCGAAAGGA TAGCATACAC GCTGGTGGGC CAATGAAATC TGTAACCTCA GCACACTCAC
1561ATGCTGCGCA CAGGAGCGAC CAAGGGAAAA AAGCCCATTC ATGCCCAACT TTCTTGTACA
1621AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)