Construct: ORF ccsbBroadEn_07755

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007137.1_s300c1, BRDN0000394787
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BTN3A1 (11119)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_007048.6 99.9% 99.8% 1366C>A
2 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_005248833.2 98.5% 98.2% 916_917ins21;1345C>A
3 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_001145008.2 89.7% 89.6% 425_426ins156;1210C>A
4 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_006714983.3 81.6% 81.4% 429_430ins282;1084C>A
5 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_006994.5 79.2% 74.6% (many diffs)
6 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_001145009.2 71.9% 66.7% (many diffs)
7 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_197974.3 71.8% 67.8% (many diffs)
8 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_194441.3 66.5% 66.4% (many diffs)
9 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_005248834.4 66.5% 66.4% (many diffs)
10 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_001743130.1 63.7% (many diffs)
11 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197246.2 58.5% 53.8% (many diffs)
12 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197247.3 58.5% 53.8% (many diffs)
13 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_007047.5 58.5% 53.8% (many diffs)
14 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248827.4 58.5% 53.8% (many diffs)
15 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010211.1 58.5% 53.8% (many diffs)
16 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010212.1 58.5% 53.8% (many diffs)
17 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714979.4 57.9% 53.2% (many diffs)
18 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714980.4 57.9% 53.2% (many diffs)
19 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714981.4 57.9% 53.2% (many diffs)
20 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514267.3 57.9% 53.2% (many diffs)
21 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197248.2 53.9% 49.7% (many diffs)
22 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197249.2 51.1% 46.7% (many diffs)
23 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010214.2 51.1% 46.7% (many diffs)
24 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714982.4 50.6% 46.3% (many diffs)
25 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514269.3 50.6% 46.3% (many diffs)
26 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010213.2 50.6% 46.3% (many diffs)
27 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248831.4 49% 46% (many diffs)
28 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248832.4 49% 46% (many diffs)
29 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_001242803.2 47.9% 46.2% (many diffs)
30 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010216.2 41.6% 38.9% (many diffs)
31 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_926039.3 41.6% (many diffs)
32 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514270.3 41.5% 37.2% (many diffs)
33 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514271.2 41.5% 37.2% (many diffs)
34 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010215.2 41.5% 37.2% (many diffs)
35 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_001743132.1 39.5% (many diffs)
36 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010217.2 34.1% 30.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1608
ORF length:
1539
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAAATGGCA AGTTTCCTGG CCTTCCTTCT GCTCAACTTT CGTGTCTGCC
121TCCTTTTGCT TCAGCTGCTC ATGCCTCACT CAGCTCAGTT TTCTGTGCTT GGACCCTCTG
181GGCCCATCCT GGCCATGGTG GGTGAAGACG CTGATCTGCC CTGTCACCTG TTCCCGACCA
241TGAGTGCAGA GACCATGGAG CTGAAGTGGG TGAGTTCCAG CCTAAGGCAG GTGGTGAACG
301TGTATGCAGA TGGAAAGGAA GTGGAAGACA GGCAGAGTGC ACCGTATCGA GGGAGAACTT
361CGATTCTGCG GGATGGCATC ACTGCAGGGA AGGCTGCTCT CCGAATACAC AACGTCACAG
421CCTCTGACAG TGGAAAGTAC TTGTGTTATT TCCAAGATGG TGACTTCTAT GAAAAAGCCC
481TGGTGGAGCT GAAGGTTGCA GCACTGGGTT CTGATCTTCA CGTTGATGTG AAGGGTTACA
541AGGATGGAGG GATCCATCTG GAGTGCAGGT CCACTGGCTG GTACCCCCAA CCCCAAATAC
601AGTGGAGCAA CAACAAGGGA GAGAACATCC CGACTGTGGA AGCACCTGTG GTTGCAGACG
661GAGTGGGCCT GTATGCAGTA GCAGCATCTG TGATCATGAG AGGCAGCTCT GGGGAGGGTG
721TATCCTGTAC CATCAGAAGT TCCCTCCTCG GCCTGGAAAA GACAGCCAGC ATTTCCATCG
781CAGACCCCTT CTTCAGGAGC GCCCAGAGGT GGATCGCCGC CCTGGCAGGG ACCCTGCCTG
841TCTTGCTGCT GCTTCTTGGG GGAGCCGGTT ACTTCCTGTG GCAACAGCAG GAGGAAAAAA
901AGACTCAGTT CAGAAAGAAA AAGAGAGAGC AAGAGTTGAG AGAAATGGCA TGGAGCACAA
961TGAAGCAAGA ACAAAGCACA AGAGTGAAGC TCCTGGAGGA ACTCAGATGG AGAAGTATCC
1021AGTATGCATC TCGGGGAGAG AGACATTCAG CCTATAATGA ATGGAAAAAG GCCCTCTTCA
1081AGCCTGCGGA TGTGATTCTG GATCCAAAAA CAGCAAACCC CATCCTCCTT GTTTCTGAGG
1141ACCAGAGGAG TGTGCAGCGT GCCAAGGAGC CCCAGGATCT GCCAGACAAC CCTGAGAGAT
1201TTAATTGGCA TTATTGTGTT CTCGGCTGTG AGAGCTTCAT ATCAGGGAGA CATTACTGGG
1261AGGTGGAGGT AGGGGACAGG AAAGAGTGGC ATATAGGGGT GTGCAGTAAG AATGTGCAGA
1321GAAAAGGCTG GGTCAAAATG ACACCTGAGA ATGGATTCTG GACTATGGGG CTGACTGATG
1381GGAATAAGTA TCGGACTCTA ACTGAGCCCA GAACCAACCT GAAACTTCCT AAGACCCCTA
1441AGAAAGTGGG GGTCTTCCTG GACTATGAGA CTGGAGATAT CTCATTCTAC AATGCTGTGG
1501ATGGATCGCA TATTCATACT TTCCTGGACG TCTCCTTCTC TGAGGCTCTA TATCCTGTTT
1561TCAGAATTTT GACCTTGGAG CCCACGGCCC TGACTATTTG TCCAGCGTTG CCAACTTTCT
1621TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)