Construct: ORF ccsbBroadEn_07760
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF001941.1_s300c1, BRDN0000396674
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- KAT7 (11143)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 11143 | KAT7 | lysine acetyltransferase 7 | NM_007067.5 | 99.8% | 100% | 768A>G;1053T>C |
| 2 | human | 11143 | KAT7 | lysine acetyltransferase 7 | NM_001199155.2 | 94.9% | 95% | 661_662ins90;678A>G;963T>C |
| 3 | human | 11143 | KAT7 | lysine acetyltransferase 7 | NM_001346706.2 | 86.7% | 86.9% | 338_339ins240;528A>G;813T>C |
| 4 | human | 11143 | KAT7 | lysine acetyltransferase 7 | NM_001199157.2 | 81.8% | 81.9% | (many diffs) |
| 5 | human | 11143 | KAT7 | lysine acetyltransferase 7 | NM_001199156.2 | 77.1% | 77.2% | 161_162ins417;351A>G;636T>C |
| 6 | human | 11143 | KAT7 | lysine acetyltransferase 7 | NM_001199158.2 | 72.2% | 72.3% | (many diffs) |
| 7 | human | 11143 | KAT7 | lysine acetyltransferase 7 | XM_011524235.3 | 53.6% | 53.6% | 0_1ins849;204T>C |
| 8 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | NM_001195003.1 | 91.4% | 99.8% | (many diffs) |
| 9 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_006533013.4 | 90.9% | 98.8% | (many diffs) |
| 10 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | NM_001195004.1 | 86.6% | 94.9% | (many diffs) |
| 11 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_006533014.4 | 86.1% | 93.9% | (many diffs) |
| 12 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_030245858.1 | 81.1% | 88.5% | (many diffs) |
| 13 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_006533015.4 | 80.6% | 87.6% | (many diffs) |
| 14 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | NM_177619.3 | 78% | 85.4% | (many diffs) |
| 15 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_030245860.1 | 76.2% | 83.6% | (many diffs) |
| 16 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_030245859.1 | 75.8% | 82.7% | (many diffs) |
| 17 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_006533016.1 | 67.8% | 74.4% | (many diffs) |
| 18 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_006533018.4 | 67.8% | 74.4% | (many diffs) |
| 19 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_030245861.1 | 62.9% | 69.5% | (many diffs) |
| 20 | mouse | 217127 | Kat7 | K(lysine) acetyltransferase 7 | XM_030245862.1 | 57.4% | 63.1% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1899
- ORF length:
- 1833
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGCC GCGAAGGAAG AGGAATGCAG GCAGTAGTTC AGATGGAACC GAAGATTCCG 121 ATTTTTCTAC AGATCTCGAG CACACAGACA GTTCAGAAAG TGATGGCACA TCCCGACGAT 181 CTGCTCGAGT CACCCGCTCC TCAGCCAGGC TAAGCCAGAG TTCTCAAGAT TCCAGTCCTG 241 TTCGAAATCT GCAGTCTTTT GGCACTGAGG AGCCTGCTTA CTCTACCAGA AGAGTGACCC 301 GTAGTCAGCA GCAGCCTACC CCAGTGACAC CGAAAAAATA CCCTCTTCGG CAGACTCGTT 361 CATCTGGTTC AGAAACTGAG CAAGTGGTTG ATTTTTCAGA TAGAGAAACT AAAAATACAG 421 CTGATCATGA TGAGTCACCG CCTCGAACTC CAACTGGAAA TGCGCCTTCT TCTGAGTCTG 481 ACATAGACAT CTCCAGCCCC AATGTATCTC ACGATGAGAG CATTGCCAAG GACATGTCCC 541 TGAAGGACTC AGGCAGTGAT CTCTCTCATC GCCCCAAGCG CCGTCGCTTC CATGAAAGCT 601 ACAACTTCAA TATGAAGTGT CCTACACCAG GCTGTAACTC TCTAGGACAC CTTACAGGAA 661 AACATGAGAG ACATTTCTCC ATCTCAGGAT GCCCACTGTA TCATAACCTC TCAGCTGACG 721 AATGCAAGGT GAGAGCACAG AGCCGGGATA AGCAGATAGA AGAAAGGATG CTGTCTCACA 781 GGCAAGATGA CAACAACAGG CATGCAACCA GGCACCAGGC ACCAACGGAG AGGCAGCTTC 841 GATATAAGGA AAAAGTGGCT GAACTCAGGA AGAAAAGAAA TTCTGGACTG AGCAAAGAAC 901 AGAAAGAGAA ATATATGGAA CACAGACAGA CCTATGGGAA CACACGGGAA CCTCTTTTAG 961 AAAACCTGAC AAGCGAGTAT GACTTGGATC TTTTCCGAAG AGCACAAGCC CGGGCTTCAG 1021 AGGATTTGGA GAAGTTAAGG CTGCAAGGCC AAATCACAGA GGGAAGCAAC ATGATTAAAA 1081 CAATTGCTTT TGGCCGCTAT GAGCTTGATA CCTGGTACCA TTCTCCATAT CCTGAAGAAT 1141 ATGCACGGCT GGGACGTCTC TATATGTGTG AATTCTGTTT AAAATATATG AAGAGCCAAA 1201 CGATACTCCG CCGGCACATG GCCAAATGTG TGTGGAAACA CCCACCTGGT GATGAGATAT 1261 ATCGCAAAGG TTCAATCTCT GTGTTTGAAG TGGATGGCAA GAAAAACAAG ATCTACTGCC 1321 AAAACCTGTG CCTGTTGGCC AAACTTTTTC TGGACCACAA GACATTATAT TATGATGTGG 1381 AGCCCTTCCT GTTCTATGTT ATGACAGAGG CGGACAACAC TGGCTGTCAC CTGATTGGAT 1441 ATTTTTCTAA GGAAAAGAAT TCATTCCTCA ACTACAACGT CTCCTGTATC CTTACTATGC 1501 CTCAGTACAT GAGACAGGGC TATGGCAAGA TGCTTATTGA TTTCAGTTAT TTGCTTTCCA 1561 AAGTCGAAGA AAAAGTTGGC TCCCCAGAAC GTCCACTCTC AGATCTGGGG CTTATAAGCT 1621 ATCGCAGTTA CTGGAAAGAA GTACTTCTCC GCTACCTGCA TAATTTTCAA GGCAAAGAGA 1681 TTTCTATCAA AGAAATCAGT CAGGAGACGG CTGTGAATCC TGTGGACATT GTCAGCACTC 1741 TGCAAGCCCT TCAGATGCTC AAATACTGGA AGGGAAAACA CCTAGTTTTA AAGAGACAGG 1801 ACCTGATTGA TGAGTGGATA GCCAAAGAGG CCAAAAGGTC CAACTCCAAT AAAACCATGG 1861 ATCCCAGCTG CTTAAAATGG ACCCCTCCCA AGGGCACTTA CCCAACTTTC TTGTACAAAG 1921 Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac