Construct: ORF ccsbBroadEn_08027

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012945.1_s300c1, BRDN0000391596
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR10H1 (26539)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26539 OR10H1 olfactory receptor family 1... NM_013940.3 99.8% 100% 393C>T
2 human 26539 OR10H1 olfactory receptor family 1... XM_011527911.1 99.8% 100% 393C>T
3 human 284433 OR10H5 olfactory receptor family 1... NM_001004466.1 94.7% 92.1% (many diffs)
4 human 26538 OR10H2 olfactory receptor family 1... NM_013939.2 88.6% 86.7% (many diffs)
5 mouse 100038860 Olfr239 olfactory receptor 239 NM_207175.2 83.2% 85.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1023
ORF length:
954
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCAGAGAGCC AATCACTCCA CAGTGACCCA ATTCATCCTC GTCGGCTTCT
121CTGTCTTCCC CCACCTCCAG CTGATGCTCT TCCTGCTGTT CCTGCTGATG TACCTGTTCA
181CGCTGCTGGG CAACCTGCTC ATCATGGCCA CCGTCTGGAG CGAGCGCAGC CTCCACACGC
241CCATGTACCT CTTCCTGTGC GCCCTCTCCG TCTCCGAGAT CCTCTACACC GTGGCCATCA
301TCCCGCGCAT GCTGGCCGAC CTGCTGTCCA CCCAGCGCTC CATCGCCTTC CTGGCCTGTG
361CCAGTCAGAT GTTCTTCTCC TTCAGCTTCG GCTTCACCCA CTCCTTCCTG CTCACCGTCA
421TGGGCTACGA CCGCTACGTG GCCATCTGCC ACCCCCTGCG TTACAACGTG CTCATGAGCC
481CGCGGGGCTG CGCCTGCCTG GTGGGCTGCT CCTGGGCTGG TGGCTTGGTC ATGGGGATGG
541TGGTGACCTC GGCCATTTTC CACCTCGCCT TCTGTGGACA CAAGGAGATC CACCATTTTG
601CTTGCCATGT GCCACCTCTG TTGAAGTTGG CCTGTGGAGA CGATGTGCTG GTGGTGGCCA
661AAGGCGTGGG CTTGGTGTGT ATCACGGCCC TGCTGGGCTG TTTTCTCCTC ATCCTCCTCT
721CCTATGCCTT CATCGTGGCC GCCATCTTGA AGATCCCTTC TGCTGAAGGT CGGAACAAGG
781CCTTCTCCAC CTGTGCCTCT CACCTCACTG TGGTGGTCGT GCACTATGGC TTTGCCTCCG
841TCATTTACCT GAAGCCCAAA AGTCCCCAGT CTCTGGAAGG AGACACCTTG ATGGGCATCA
901CCTACACGGT CCTCACACCC TTCCTCAGCC CCATCATCTT CAGCCTCAGG AACAAGGAGC
961TGAAGGTCGC CATGAAGAAG ACCTTCTTCA GTAAACTCTA CCCAGAAAAA AATGTAATGA
1021TGTTGCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1081gcaacgaac

Download FASTA (ORF) (Full)

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