Construct: ORF ccsbBroadEn_08454

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012942.1_s300c1, BRDN0000395717
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BANK1 (55024)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55024 BANK1 B cell scaffold protein wit... NM_001083907.3 99.9% 99.8% 1230G>A;1858T>C
2 human 55024 BANK1 B cell scaffold protein wit... XM_017008337.2 99.9% 99.8% 1230G>A;1858T>C
3 human 55024 BANK1 B cell scaffold protein wit... NM_017935.5 96% 96% 1_90del;1320G>A;1948T>C
4 human 55024 BANK1 B cell scaffold protein wit... NM_001127507.2 84.5% 81.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2331
ORF length:
2265
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAT ATATGAAGAA GATGCTGAGG AATGGGCTCT GTACTTGACA GAAGTATTTT
121TACATGTTGT GAAAAGGGAA GCCATCCTGT TATATCGCTT GGAGAATTTC TCTTTTCGGC
181ATTTGGAGTT GCTGAACTTA ACGTCTTACA AATGTAAACT TTTGATATTA TCAAATAGCC
241TGCTTAGAGA CCTAACTCCA AAGAAATGTC AGTTTCTGGA AAAGATACTT CATTCACCAA
301AAAGTGTAGT TACTTTGCTT TGTGGAGTGA AGAGTTCAGA TCAGCTCTAT GAATTACTAA
361ATATCTCTCA AAGCAGATGG GAGATCTCAA CTGAACAGGA ACCTGAAGAC TACATCTCTG
421TAATCCAGAG TATCATATTC AAAGATTCTG AAGACTACTT TGAGGTCAAC ATTCCAACAG
481ACCTACGAGC AAAACATTCT GGGGAAATAA GTGAGAGAAA GGAAATTGAA GAACTATCAG
541AAGCTTCAAG AAACACCATA CCACTAGCAG TGGTGCTTCC CACTGAAATT CCATGTGAGA
601ATCCTGGTGA AATATTCATA ATTTTGAGAG ATGAAGTAAT TGGTGATACT GTAGAGGTTG
661AATTTACATC AAGTAATAAG CGCATTAGAA CACGGCCAGC CCTTTGGAAT AAGAAAGTCT
721GGTGCATGAA AGCTTTAGAG TTTCCTGCTG GTTCAGTCCA TGTCAATGTC TACTGTGATG
781GAATCGTTAA AGCTACAACC AAAATTAAGT ACTACCCAAC AGCAAAGGCA AAGGAATGCC
841TATTCAGAAT GGCAGATTCA GGAGAGAGTT TGTGCCAGAA TAGCATTGAA GAACTTGATG
901GTGTCCTTAC ATCCATATTC AAACATGAGA TACCATATTA TGAGTTCCAG TCTCTTCAAA
961CTGAAATTTG TTCTCAAAAC AAATATACTC ATTTCAAAGA ACTTCCAACT CTTCTCCACT
1021GTGCAGCAAA ATTTGGCTTA AAGAACCTGG CTATTCATTT GCTTCAATGT TCAGGAGCAA
1081CCTGGGCATC TAAGATGAAA AATATGGAGG GTTCAGACCC CGCACATATT GCTGAAAGGC
1141ATGGTCACAA AGAACTCAAG AAAATCTTCG AAGACTTTTC AATCCAAGAA ATTGACATAA
1201ATAATGAGCA AGAAAATGAT TATGAAGAGG ATATTGCCTC ATTTTCCACA TATATTCCTT
1261CCACACAGAA CCCAGCATTT CATCATGAAA GCAGAAAGAC ATACGGGCAG AGTGCAGATG
1321GAGCTGAGGC AAATGAAATG GAAGGGGAAG GAAAACAGAA TGGATCAGGC ATGGAGACCA
1381AACACAGCCC ACTAGAGGTT GGCAGTGAGA GTTCTGAAGA CCAGTATGAT GACTTGTATG
1441TGTTCATTCC TGGTGCTGAT CCAGAAAATA ATTCACAAGA GCCACTCATG AGCAGCAGAC
1501CTCCTCTCCC CCCGCCGCGA CCTGTAGCTA ATGCCTTCCA ACTGGAAAGA CCTCACTTCA
1561CCTTACCAGG GACAATGGTG GAAGGCCAAA TGGAAAGAAG TCAAAACTGG GGTCATCCTG
1621GTGTTAGACA AGAAACAGGA GATGAACCCA AAGGAGAAAA AGAGAAGAAA GAAGAGGAAA
1681AAGAGCAGGA GGAGGAAGAA GACCCATATA CTTTTGCTGA GATTGATGAC AGTGAATATG
1741ACATGATATT GGCCAATCTG AGTATAAAGA AAAAAACTGG GAGTCGGTCT TTCATTATAA
1801ATAGACCTCC TGCCCCCACA CCCCGACCCA CAAGTATACC TCCAAAAGAG GAAACTACAC
1861CTTACATAGC TCAAGTGTTT CAACAAAAGA CAGCCAGAAG ACAATCTGAT GATGACAAGT
1921TCCGTGGTCT TCCTAAGAAA CAAGACAGAG CTCGGATAGA GAGTCCAGCC TTTTCTACTC
1981TCAGGGGCTG TCTAACTGAT GGTCAGGAAG AACTCATCCT CCTGCAGGAG AAAGTAAAGA
2041ATGGGAAAAT GTCTATGGAT GAAGCTCTGG AGAAATTTAA ACACTGGCAG ATGGGAAAAA
2101GTGGCCTGGA AATGATTCAG CAGGAGAAAT TACGACAACT ACGAGACTGC ATTATTGGGA
2161AAAGGCCAGA AGAAGAAAAT GTCTATAATA AACTCACCAT TGTGCACCAT CCAGGTGGTA
2221AGGAAACTGC CCACAATGAA AATAAGTTTT ATAATGTACA CTTCAGCAAT AAGCTTCCTG
2281CTCGACCCCA AGTTGAAAAG GAATTTGGTT TCTGTTGCAA GAAAGATCAT TACCCAACTT
2341TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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