Construct: ORF ccsbBroadEn_08489

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011612.1_s300c1, BRDN0000392982
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
APPL2 (55198)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55198 APPL2 adaptor protein, phosphotyr... NM_018171.5 99.7% 99.8% (many diffs)
2 human 55198 APPL2 adaptor protein, phosphotyr... NM_001251904.1 98.9% 98.9% (many diffs)
3 human 55198 APPL2 adaptor protein, phosphotyr... XM_017019551.2 97.5% 97.4% (many diffs)
4 human 55198 APPL2 adaptor protein, phosphotyr... XM_011538530.3 96.7% 96.5% (many diffs)
5 human 55198 APPL2 adaptor protein, phosphotyr... NM_001251905.1 93.3% 93.3% (many diffs)
6 human 55198 APPL2 adaptor protein, phosphotyr... XM_017019552.2 93.3% 93.3% (many diffs)
7 human 55198 APPL2 adaptor protein, phosphotyr... XM_017019553.2 93.3% 93.3% (many diffs)
8 human 55198 APPL2 adaptor protein, phosphotyr... XM_017019554.1 92.7% 92.7% (many diffs)
9 human 55198 APPL2 adaptor protein, phosphotyr... XM_011538531.3 92.4% 92.5% (many diffs)
10 human 55198 APPL2 adaptor protein, phosphotyr... XM_011538532.3 92.4% 92.5% (many diffs)
11 human 55198 APPL2 adaptor protein, phosphotyr... XM_006719472.1 91.8% 91.9% (many diffs)
12 human 55198 APPL2 adaptor protein, phosphotyr... XR_001748796.1 62.6% (many diffs)
13 human 55198 APPL2 adaptor protein, phosphotyr... XR_001748795.1 62.2% (many diffs)
14 mouse 216190 Appl2 adaptor protein, phosphotyr... NM_145220.2 87.6% 92.3% (many diffs)
15 mouse 216190 Appl2 adaptor protein, phosphotyr... XM_006513508.3 82.6% 84.5% (many diffs)
16 mouse 216190 Appl2 adaptor protein, phosphotyr... XM_006513509.3 81.9% 86.8% (many diffs)
17 mouse 216190 Appl2 adaptor protein, phosphotyr... XM_006513510.2 80.4% 84.4% (many diffs)
18 mouse 216190 Appl2 adaptor protein, phosphotyr... XM_011243404.1 80.4% 84.4% (many diffs)
19 mouse 216190 Appl2 adaptor protein, phosphotyr... XM_017313895.1 74.7% 79% (many diffs)
20 mouse 216190 Appl2 adaptor protein, phosphotyr... XM_006513511.3 72.9% 76.3% (many diffs)
21 mouse 216190 Appl2 adaptor protein, phosphotyr... XR_380384.3 54.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2058
ORF length:
1992
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC CGCCGTGGAC AAGCTCCTGC TAGAGGAGGC GTTGCAGGAC AGCCCCCAGA
121CTCGCTCTTT ACTGAGCGTG TTTGAAGAAG ATGCTGGCAC CCTCACAGAC TATACCAACC
181AGCTGCTCCA GGCAATGCAG CGCGTCTATG GAGCCCAGAA TGAGATGTGC CTGGCCACAC
241AACAGCTTTC TAAGCAACTG CTGGCATATG AAAAACAGAA CTTTGCTCTT GGCAAAGGTG
301ATGAAGAAGT AATTTCAACA CTCCACTATT TTTCCAAAGT GGTGGATGAG CTTAATCTTC
361TCCATACAGA GCTGGCTAAA CAGTTGGCAG ACACAATGGT TCTACCTATC ATACAATTCC
421GAGAAAAGGA TCTCACAGAA GTAAGCACTT TAAAGGATCT ATTTGGACTC GCTAGCAATG
481AGCATGACCT CTCAATGGCA AAATACAGCA GGCTGCCTAA GAAAAAGGAG AATGAGAAGG
541TGAAGACCGA AGTCGGAAAA GAGGTGGCCG CGGCCCGGCG GAAGCAGCAT CTCTCCTCCC
601TTCAGTACTA CTGTGCCCTC AACGCGCTGC AGTACAGAAA GCAAATGGCC ATGATGGAGC
661CCATGATAGG CTTTGCCCAT GGACAGATTA ACTTTTTTAA GAAGGGAGCA GAGATGTTTT
721CCAAACGTAT GGACAGCTTT TTATCCTCCG TTGCAGACAT GGTTCAAAGC ATTCAGGTAG
781AACTGGAAGC CGAGGCGGAA AAGATGCGGG TGTCCCAGCA AGAATTACTT TCTGTTGATG
841AATCTGTTTA CACTCCAGAC TCTGATGTGG CCGCACCACA GATCAACAGG AACCTCATCC
901AGAAGGCTGG TTACCTTAAT CTTAGAAACA AAACAGGGCT GGTCACCACC ACCTGGGAGA
961GGCTTTATTT CTTCACCCAA GGCGGGAATC TCATGTGTCA GCCCAGGGGA GCCGTGGCTG
1021GAGGTTTGAT CCAGGACCTG GACAACTGCT CAGTGATGGC CGTGGATTGC GAAGACCGGC
1081GCTACTGCTT CCAGATCACC ACGCCCAATG GAAAATCGGG AATAATCCTC CAGGCTGAGA
1141GCAGAAAGGA AAATGAAGAG TGGATATGTG CAATAAACAA CATCTCCAGA CAGATCTACC
1201TGACCGACAA CCCTGAGGCA GTCGCGATCA AGTTGAATCA GACCGCTCTG CAAGCAGTGA
1261CTCCCATTAC AAGTTTTGGA AAAAAACAAG AAAGCTCATG CCCCAGCCAG AACCTGAAAA
1321ATTCAGAGAT GGAAAATGAA AATGACAAGA TTGTTCCCAA AGTAACAGCC AGTCTACCTG
1381AAGCAGAGGA GCTGATCGCG CCTGGAACGC CGATTCAATT CGATATTGTG CTTCCTGCTA
1441CAGAATTCCT TGATCAGAAC AGAGGGAGCA GGCGTACCAA CCCTTTTGGT GAAACTGAGG
1501ATGAATCATT TCCAGAAGCA GAAGATTCTC TTTTGCAGCA GATGTTTATA GTTCGGTTTT
1561TGGGATCAAT GGCAGTTAAA ACAGACAGCA CTACTGAAGT GATTTATGAA GCGATGAGAC
1621AAGTATTGGC TGCTCGGGCT ATTCATAACA TCTTCCGCAT GACAGAATCC CATCTGATGG
1681TCACCAGTCA ATCTTTGAGG TTGATAGATC CACAGACTCA AGTATCAAGG GCCAATTTTG
1741AACTTACCAG TGTCACACAA TTTGCTGCTC ATCAAGAAAA CAAGAGACTG GTTGGTTTTG
1801TCATCCGTGT TCCTGAATCC ACTGGAGAAG AATCTCTGAG TACATACATT TTTGAAAGCA
1861ACTCAGAAGG CGAAAAGATA TGTTATGCTA TTAATTTGGG AAAAGAAATT ATTGAGGTTC
1921AGAAGGATCC AGAAGCACTG GCTCAATTAA TGCTGTCCAT ACCACTAACC AATGATGGAA
1981AATATGTACT GTTAAACGAT CAACCAGATG ACGATGATGG AAATCCAAAT GAACATAGAG
2041GCGCAGAATC CGAAGCATAC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
2101gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)