Construct: ORF ccsbBroadEn_09908

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010032.1_s300c1, BRDN0000394742
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF718 (255403)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 255403 ZNF718 zinc finger protein 718 NM_001039127.6 100% 100%
2 human 255403 ZNF718 zinc finger protein 718 NM_001289930.1 93.3% 93.3% 0_1ins96
3 human 255403 ZNF718 zinc finger protein 718 NM_001289931.1 93.3% 93.3% 0_1ins96
4 human 255403 ZNF718 zinc finger protein 718 XM_017007979.2 93.3% 93.3% 0_1ins96
5 human 255403 ZNF718 zinc finger protein 718 XM_017007980.2 93.3% 93.3% 0_1ins96
6 human 152687 ZNF595 zinc finger protein 595 NM_182524.4 63.1% 54.6% (many diffs)
7 human 255403 ZNF718 zinc finger protein 718 NR_110529.1 36.8% (many diffs)
8 human 7700 ZNF141 zinc finger protein 141 NM_001348278.2 36.1% 30.2% (many diffs)
9 human 7700 ZNF141 zinc finger protein 141 NM_001348280.2 16.6% 14.2% (many diffs)
10 human 107986244 LOC107986244 zinc finger protein 141-like XM_017008889.1 14.1% 12% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1503
ORF length:
1434
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAACTCTTA ACATTCAAGG ATGTGGCCAT AGAATTCTCT CCAGAAGAGT
121GGAAATGTCT GGACACTTCC CAGCAGAATT TATATAGAGA TGTGATGTTG GAGAACTACA
181GAAACCTGGT CTCCCTGGGT GTTAGTATCT CTAACCCAGA CCTGGTCACC AGTCTGGAGC
241AAAGAAAAGA GCCCTACAAT TTGAAGATAC ATGAAACAGC AGCCAGACCC CCAGCTGTGT
301GTTCTCATTT CACCCAAAAC CTTTGGACAG TGCAGGGCAT AGAAGATTCA TTCCACAAAC
361TTATACCAAA AGGACATGAG AAACGTGGAC ATGAGAATTT AAGAAAAACT TGTAAAAGTA
421TAAATGAGTG TAAGGTGCAG AAAGGTGGTT ATAATAGAAT TAACCAATGC TTATTAACTA
481CCCAGAAAAA AACAATTCAA TCTAATATAT GTGTCAAAGT TTTTCATAAA TTTTCAAATT
541CAAACAAAGA TAAGATAAGA TATACTGGAG ATAAAACCTT TAAATGTAAA GAATGTGGCA
601AATCATTTCA CGTGCTCTCA CGCCTAACTC AACACAAAAG AATTCATACT GGAGAGAACC
661CCTACACATG TGAAGAATGT GGCAAAGCCT TTAATTGGTC CTCAATTCTT ACTAAACATA
721AGAGAATTCA TGCCAGAGAG AAATTCTACA AGTGTGAAGA ATGTGGTAAA GGCTTTACTC
781GGTCCTCACA CCTTACTAAA CATAAGAGAA TTCATACTGG AGAGAAACCC TACATATGTG
841AAAAATGTGG TAAAGCTTTT AACCAATCCT CAACCCTTAA TTTACATAAG AGAATTCATT
901CTGCACAAAA ATACTACAAA TGTGAAGAAT GTGGTAAAGC CTTTAAGTGG TCCTCATCCC
961TTAATGAACA TAAGAGAATT CATGCTGGAG AGAAACCCTT CTCATGCGAA GAATGTGGCA
1021ATGTCTTTAC CACATCCTCA GACTTTGCTA AACATAAGAG AATTCATACA GGAGAGAAAC
1081CCTACAAATG TGAAGAATGT GGAAAATCCT TTAATAGGTC CACAACTCTT ACGACACATA
1141AGAGAATCCA TACTGGAGAG AAACCCTACA CATGTGAAGA ATGTGGAAAA GCCTTTAATT
1201GGTCCTCAAC CCTTAATGTA CACAAGAGAA TTCACTCTGG AAAAAATCCC TACAAATGTG
1261AAGATTGTGG CAAAGCCTTT AAAGTGTTTG CAAACCTGCA TAATCATAAG AAAATTCATA
1321CTGGAGAGAA ACCCTACATA TGTAAACAAT GTGGCAAAGC CTTTAAACAG TCCTCACACT
1381TGAATAAACA TAAGAAAATT CACACTGTAG ATAAACCCTA CAAATGTAAA GAATGCGGGA
1441AAGCTTTTAA GCAGTACTCC AACCTTCCTC AACATAAGAG AACTCATACT GGAGGAAAAT
1501TTTTGCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1561gcaacgaac

Download FASTA (ORF) (Full)