Construct: ORF ccsbBroadEn_10271

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010582.1_s300c1, BRDN0000388697
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD36BP1 (84832)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84832 ANKRD36BP1 ankyrin repeat domain 36B p... NR_026844.1 18.9% 1_385del;743_1879del
2 human 57730 ANKRD36B ankyrin repeat domain 36B XM_024453027.1 14% 10.6% (many diffs)
3 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004592.2 13.3% 10% (many diffs)
4 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004593.2 13.3% 10% (many diffs)
5 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004594.2 13.3% 10% (many diffs)
6 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004595.2 13.3% 10% (many diffs)
7 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004590.2 10.7% 8.1% (many diffs)
8 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004589.2 9.8% 7.3% (many diffs)
9 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004588.2 9.7% 7.3% (many diffs)
10 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004587.2 9.6% 7.2% (many diffs)
11 human 57730 ANKRD36B ankyrin repeat domain 36B XM_024453026.1 9.6% 7.2% (many diffs)
12 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004585.2 9.5% 7.2% (many diffs)
13 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004584.2 8.6% 6.5% (many diffs)
14 human 57730 ANKRD36B ankyrin repeat domain 36B XR_002959321.1 8.5% (many diffs)
15 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004583.2 8.2% 6.2% (many diffs)
16 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004579.2 8.1% 6.1% (many diffs)
17 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004580.2 8.1% 6.1% (many diffs)
18 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004581.2 8.1% 6.1% (many diffs)
19 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004582.2 8.1% 6.1% (many diffs)
20 human 57730 ANKRD36B ankyrin repeat domain 36B XR_001738869.2 8% (many diffs)
21 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004578.2 7.9% 6% (many diffs)
22 human 57730 ANKRD36B ankyrin repeat domain 36B NM_025190.3 7.9% 6% (many diffs)
23 human 57730 ANKRD36B ankyrin repeat domain 36B XM_005263995.5 7.9% 6% (many diffs)
24 human 57730 ANKRD36B ankyrin repeat domain 36B XM_006712661.2 7.9% 6% (many diffs)
25 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004050.1 7.8% 5.9% (many diffs)
26 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004051.1 7.8% 5.9% (many diffs)
27 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004049.1 7.4% 5.5% (many diffs)
28 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004048.1 6.6% 4.9% (many diffs)
29 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004047.1 6.5% 4.9% (many diffs)
30 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004046.1 6.4% 4.8% (many diffs)
31 human 57730 ANKRD36B ankyrin repeat domain 36B XR_001738871.1 6.2% (many diffs)
32 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004044.1 6% 4.5% (many diffs)
33 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004045.1 6% 4.5% (many diffs)
34 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004039.1 5.9% 4.5% (many diffs)
35 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004040.1 5.9% 4.5% (many diffs)
36 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004041.1 5.9% 4.5% (many diffs)
37 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004043.1 5.9% 4.5% (many diffs)
38 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004025.1 5.8% 4.4% (many diffs)
39 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004026.1 5.8% 4.4% (many diffs)
40 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004027.1 5.8% 4.4% (many diffs)
41 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004028.1 5.8% 4.4% (many diffs)
42 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004030.1 5.8% 4.4% (many diffs)
43 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004031.1 5.8% 4.4% (many diffs)
44 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004032.1 5.8% 4.4% (many diffs)
45 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004033.1 5.8% 4.4% (many diffs)
46 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004034.1 5.8% 4.4% (many diffs)
47 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004035.1 5.8% 4.4% (many diffs)
48 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004036.1 5.8% 4.4% (many diffs)
49 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004037.1 5.8% 4.4% (many diffs)
50 human 375248 ANKRD36 ankyrin repeat domain 36 XM_024452877.1 5.8% 4.4% (many diffs)
51 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004024.1 5.7% 4.3% (many diffs)
52 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004011.1 5.7% 4.3% (many diffs)
53 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004012.1 5.7% 4.3% (many diffs)
54 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004013.1 5.7% 4.3% (many diffs)
55 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004014.1 5.7% 4.3% (many diffs)
56 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004015.1 5.7% 4.3% (many diffs)
57 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004016.1 5.7% 4.3% (many diffs)
58 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004017.1 5.7% 4.3% (many diffs)
59 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004018.1 5.7% 4.3% (many diffs)
60 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004019.1 5.7% 4.3% (many diffs)
61 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004020.1 5.7% 4.3% (many diffs)
62 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004021.1 5.7% 4.3% (many diffs)
63 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004022.1 5.7% 4.3% (many diffs)
64 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004023.1 5.7% 4.3% (many diffs)
65 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004010.1 5.6% 4.2% (many diffs)
66 human 375248 ANKRD36 ankyrin repeat domain 36 NM_001354587.1 5.6% 4.2% (many diffs)
67 human 375248 ANKRD36 ankyrin repeat domain 36 XM_006712514.3 5.6% 4.2% (many diffs)
68 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004009.1 5.6% 4.2% (many diffs)
69 human 57730 ANKRD36B ankyrin repeat domain 36B XR_922976.2 5.5% (many diffs)
70 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959292.1 5.2% (many diffs)
71 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959293.1 4.9% (many diffs)
72 human 400986 ANKRD36C ankyrin repeat domain 36C NM_001310154.3 4.9% 3.7% (many diffs)
73 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959294.1 3.5% (many diffs)
74 human 375248 ANKRD36 ankyrin repeat domain 36 XR_922917.2 3.1% (many diffs)
75 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738739.2 2.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
423
ORF length:
357
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG AACAAGAACT CTGCAGTTTG AGATTTCTGA TAGTCATGAA AAAGAAGAAG
121ACCTGTTGCA TAAAAACCAT TTGATGCAAG ATGAAATTGC CAGGCTCAGG CTGGAAATAC
181ACACAATAAA AAATCAAATC CTGGAAAAGA AATACTTAAA AGACATTGAA ATTATAAAAA
241GAAAGCATGA AGACCTTCAA AAGGCTCTAA AACAGAATGG GGAAAAATCA ACAAAAACGA
301TAGCCCATTA TAGTGGACAG CTTACTGCTC TGACAGATGA GAACACAATG CTCCGTTCTA
361AACTGGAGAA GGAAAAACAA AGCAGGCAAA GACTGACGAA ATGGAATCAT ACCATCGTAG
421ACTGCCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
481gcaacgaac

Download FASTA (ORF) (Full)