Construct: ORF ccsbBroadEn_13471

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017327.1_s300c1, BRDN0000386876
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF144B (255488)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 255488 RNF144B ring finger protein 144B NM_182757.3 99.4% 99.6% 669C>T;819A>C;823_825delTTG
2 human 255488 RNF144B ring finger protein 144B XM_005248986.3 87.8% 88.1% (many diffs)
3 mouse 218215 Rnf144b ring finger protein 144B NM_001170643.1 84.1% 87.7% (many diffs)
4 mouse 218215 Rnf144b ring finger protein 144B NM_146042.4 84.1% 87.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
972
ORF length:
906
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG CTCAGCTGGT AGGCTCCACT ATCTCGCCAT GACTGCTGAA AATCCCACTC
121CTGGAGACCT GGCTCCGGCC CCCCTCATCA CTTGCAAACT CTGCCTGTGT GAGCAGTCTC
181TGGACAAGAT GACCACACTC CAGGAATGCC AGTGCATCTT TTGCACAGCT TGCCTGAAAC
241AGTACATGCA GCTGGCAATC CGAGAAGGAT GTGGGTCTCC CATCACTTGC CCTGACATGG
301TGTGCCTAAA CCACGGGACC CTGCAGGAAG CTGAGATTGC CTGTTTGGTA CCTGTGGACC
361AGTTTCAACT TTATCAGAGG TTAAAATTTG AAAGAGAAGT TCATCTGGAC CCCTACCGAA
421CATGGTGTCC TGTTGCAGAC TGTCAGACAG TGTGCCCTGT TGCCTCGAGT GACCCAGGAC
481AGCCTGTGCT GGTGGAATGC CCTTCTTGCC ACCTGAAATT CTGCTCGTGT TGCAAGGATG
541CTTGGCATGC AGAGGTCTCC TGTAGAGACA GTCAGCCTAT TGTCCTGCCA ACAGAGCACC
601GAGCCCTCTT TGGGACAGAT GCAGAAGCCC CCATTAAGCA GTGCCCAGTT TGCCGGGTTT
661ATATCGAACG CAATGAAGGC TGCGCTCAGA TGATGTGCAA AAACTGCAAG CATACATTTT
721GCTGGTACTG CCTTCAGAAC TTGGATAATG ACATTTTCCT CAGACATTAT GACAAAGGGC
781CATGCAGGAA TAAACTTGGC CACTCAAGAG CATCAGTGAT GTGGAACCGA ACACAGGTGG
841TGGGGATTCT CGTAGGCTTG GGCATCATTG CCTTGGTTAC TTCCCCCTTA CTCCTGGCCT
901CCCCATGTAT AATCTGTTGT GTCTGCAAGT CCTGTCGGGG CAAGAAGAAA AAGCACGACC
961CATCCACAAC CTACCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1021caatttgttg caacgaac

Download FASTA (ORF) (Full)

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