Construct: ORF ccsbBroadEn_14947

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016088.1_s300c1, BRDN0000458459
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TLK1 (9874)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9874 TLK1 tousled like kinase 1 NM_012290.5 99.9% 100% 900C>T
2 human 9874 TLK1 tousled like kinase 1 NM_001136554.2 93.6% 93.7% 0_1ins144;756C>T
3 human 9874 TLK1 tousled like kinase 1 XM_011512238.3 91.7% 91.7% 900C>T;980_981ins189
4 human 9874 TLK1 tousled like kinase 1 NM_001136555.2 86.5% 85.6% (many diffs)
5 human 9874 TLK1 tousled like kinase 1 XM_017005422.2 71.6% 71.6% 0_1ins651;249C>T
6 human 9874 TLK1 tousled like kinase 1 XM_024453261.1 71.6% 71.6% 0_1ins651;249C>T
7 human 9874 TLK1 tousled like kinase 1 XM_024453262.1 71.6% 71.6% 0_1ins651;249C>T
8 human 9874 TLK1 tousled like kinase 1 XR_001739084.2 46.9% (many diffs)
9 human 9874 TLK1 tousled like kinase 1 XR_001739085.2 46.1% (many diffs)
10 mouse 228012 Tlk1 tousled-like kinase 1 NM_172664.3 91.9% 98.1% (many diffs)
11 mouse 228012 Tlk1 tousled-like kinase 1 XM_006499189.3 87.5% 93.4% (many diffs)
12 mouse 228012 Tlk1 tousled-like kinase 1 XM_006499188.3 87.4% 92.6% (many diffs)
13 mouse 228012 Tlk1 tousled-like kinase 1 XM_006499190.3 85.7% 92% (many diffs)
14 mouse 228012 Tlk1 tousled-like kinase 1 XM_006499191.1 65.4% 70.4% (many diffs)
15 mouse 228012 Tlk1 tousled-like kinase 1 XM_006499193.1 65.4% 70.4% (many diffs)
16 mouse 228012 Tlk1 tousled-like kinase 1 XM_017317580.1 65.4% 70.4% (many diffs)
17 mouse 228012 Tlk1 tousled-like kinase 1 XM_017317581.1 65.4% 70.4% (many diffs)
18 mouse 228012 Tlk1 tousled-like kinase 1 XR_374441.3 45.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2364
ORF length:
2298
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgag tgtccaaagt agcagtggaa gtttggaggg gccgccatct tggtcccagc
121tctccacgtc tccaaccccg ggctcggcgg cggcggccag gtccctgctg aatcacacgc
181cgccatccgg gaggcccagg gaaggtgcaa tggatgagct tcatagtctg gatccaagaa
241ggcaagagtt attggaagct agatttactg gagttgcaag tgggagcact ggaagtacgg
301gcagttgcag tgttggagct aaagcctcaa caaataacga aagctctaat cacagttttg
361gaagcttggg atctttaagt gacaaagaat cagagacacc ggagaagaaa caatcggaat
421catccagggg aagaaagaga aaagcagaaa accagaatga aagtagtcag ggaaaaagta
481ttgggggacg tggccacaaa attagcgact attttgaata ccagggtgga aatggctcaa
541gtccagtaag aggcatacct cctgcaatcc gttctcctca aaattcacat tcacattcca
601ctccttcctc atctgttcga ccgaatagcc cttctcctac tgcattagca tttggggacc
661accctattgt acaaccaaag caattatcct ttaaaattat tcagactgat ctcacaatgc
721tgaaattagc agcattagaa agtaataaaa tccaggacct ggaaaagaag gagggacgta
781tagatgattt gctcagggct aactgtgatc tcagacggca aatagatgaa caacaaaaat
841tacttgaaaa atacaaagaa cgattaaata agtgcatatc aatgagcaag aaacttctta
901ttgaaaagag tacacaagaa aagctgtcaa gcagagagaa gagtatgcaa gatcgattac
961gccttgggca ctttacaaca gttagacatg gcgcttcatt tactgaacaa tggacagatg
1021gttttgcatt tcagaatctt gtgaagcaac aagaatgggt gaatcagcaa agggaagata
1081ttgaaaggca aaggaaactt ctagccaaac gcaaacctcc cacagctaat aattctcagg
1141caccctctac caattctgaa ccaaaacaaa ggaaaaacaa agcagtcaat ggagcagaga
1201atgatccctt tgttagacca aatttaccac aactgttgac tttggcagaa tatcatgaac
1261aggaagaaat tttcaaactt agactaggac atctcaaaaa ggaagaggca gaaatccagg
1321cagaacttga acgtttggaa agagtcagaa atcttcacat acgtgagctg aaaagaataa
1381acaatgaaga taattcacag ttcaaagatc acccaacatt aaatgaaaga tatttattac
1441ttcatctgct tggtagaggt ggctttagtg aagtgtataa ggcttttgac ctttatgaac
1501aaagatatgc tgctgtgaag atacatcagc ttaataaaag ctggagagat gagaagaaag
1561aaaactacca caaacatgcc tgcagagagt atagaataca caaagaactg gatcacccca
1621gaatagttaa actctatgat tatttctcct tggatacaga tacgttttgt acagtgttag
1681aatactgtga aggcaatgac ttggatttct atctgaagca acacaagtta atgtcagaga
1741aagaagctcg gtctattgta atgcagattg taaatgcact aagatatctc aatgagatca
1801aaccccctat tatacattat gatcttaagc caggaaacat cctactggta gatggaacag
1861catgtggtga aatcaaaatc actgattttg gtctgtccaa gattatggat gatgatagct
1921atggtgtaga tggaatggat ctaacttccc agggggcagg cacttactgg tatttacctc
1981ctgagtgttt tgtagttgga aaagagccac caaagatttc caacaaggtt gatgtatggt
2041cggttggagt catcttcttt cagtgtcttt atggtagaaa gccatttggt cacaatcaat
2101ctcaacaaga cattcttcaa gaaaatacaa tattaaaagc cacagaagtc cagttccctg
2161taaaaccggt tgtaagcagt gaagccaagg catttataag acgctgtttg gcatatcgaa
2221aagaagatcg atttgatgtg caccagctgg caaatgaccc ataccttctc ccacacatga
2281gaagatcaaa ttcttcagga aacctacaca tggctgggct gacagcatcc cctacacccc
2341cttcttcaag cataattact tactgcccaa ctttcttgta caaagttggc attataagaa
2401agcattgctt atcaatttgt tgcaacgaac

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