Construct: ORF ccsbBroadEn_15391

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017043.1_s300c1, BRDN0000385296
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CTBP2 (1488)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1488 CTBP2 C-terminal binding protein 2 NM_001083914.3 100% 100%
2 human 1488 CTBP2 C-terminal binding protein 2 NM_001290214.3 100% 100%
3 human 1488 CTBP2 C-terminal binding protein 2 NM_001290215.3 100% 100%
4 human 1488 CTBP2 C-terminal binding protein 2 NM_001321012.2 100% 100%
5 human 1488 CTBP2 C-terminal binding protein 2 NM_001321013.2 100% 100%
6 human 1488 CTBP2 C-terminal binding protein 2 NM_001321014.2 100% 100%
7 human 1488 CTBP2 C-terminal binding protein 2 NM_001329.4 100% 100%
8 human 1488 CTBP2 C-terminal binding protein 2 XM_005269561.3 100% 100%
9 human 1488 CTBP2 C-terminal binding protein 2 XM_005269564.3 100% 100%
10 human 1488 CTBP2 C-terminal binding protein 2 XM_005269567.3 100% 100%
11 human 1488 CTBP2 C-terminal binding protein 2 XM_005269568.5 100% 100%
12 human 1488 CTBP2 C-terminal binding protein 2 XM_005269569.3 100% 100%
13 human 1488 CTBP2 C-terminal binding protein 2 XM_005269571.3 100% 100%
14 human 1488 CTBP2 C-terminal binding protein 2 XM_005269572.4 100% 100%
15 human 1488 CTBP2 C-terminal binding protein 2 XM_006717642.3 100% 100%
16 human 1488 CTBP2 C-terminal binding protein 2 XM_011539351.2 100% 100%
17 human 1488 CTBP2 C-terminal binding protein 2 XM_011539353.2 100% 100%
18 human 1488 CTBP2 C-terminal binding protein 2 XM_011539354.2 100% 100%
19 human 1488 CTBP2 C-terminal binding protein 2 XM_011539355.2 100% 100%
20 human 1488 CTBP2 C-terminal binding protein 2 XM_017015756.2 100% 100%
21 human 1488 CTBP2 C-terminal binding protein 2 XM_017015757.2 100% 100%
22 human 1488 CTBP2 C-terminal binding protein 2 XM_024447830.1 100% 100%
23 human 1488 CTBP2 C-terminal binding protein 2 XM_011539357.2 94.3% 94.3% 0_1ins75
24 human 1488 CTBP2 C-terminal binding protein 2 XM_011539358.2 94.3% 94.3% 0_1ins75
25 human 1488 CTBP2 C-terminal binding protein 2 XM_024447831.1 94.3% 94.3% 0_1ins75
26 human 1488 CTBP2 C-terminal binding protein 2 NM_001363508.2 85.4% 82.4% (many diffs)
27 human 1488 CTBP2 C-terminal binding protein 2 NM_022802.3 44% 43.7% (many diffs)
28 human 403340 MGC70870 C-terminal binding protein ... NR_003682.1 37% (many diffs)
29 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_009980.4 89.5% 99.5% (many diffs)
30 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507308.3 89.5% 99.5% (many diffs)
31 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507309.3 89.5% 99.5% (many diffs)
32 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507310.3 89.5% 99.5% (many diffs)
33 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507311.3 89.5% 99.5% (many diffs)
34 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507312.3 89.5% 99.5% (many diffs)
35 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507314.3 86.4% 95.2% (many diffs)
36 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_001347623.1 84.1% 93.9% (many diffs)
37 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507315.3 84.1% 93.9% (many diffs)
38 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_001170744.1 39.8% 43.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1401
ORF length:
1335
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc ccttgtggat aagcacaaag tcaagagaca gcgattggac agaatttgtg
121aaggtatccg cccccagatc atgaacggcc ccctgcaccc ccgccccctg gtggcgctgc
181tggacggccg cgactgcact gtggagatgc ccatcctgaa ggacctggcc actgtggcct
241tctgtgacgc gcagtcgacg caggaaatcc acgagaaggt tctaaacgaa gccgtgggcg
301ccatgatgta ccacaccatc accctcacca gggaggacct ggagaagttc aaggccctga
361gagtgatcgt gcggataggc agtggctatg acaacgtgga catcaaggct gccggcgagc
421tcggaattgc cgtgtgcaac atcccgtctg cagccgtgga agagacagcg gactctacca
481tctgccacat cctcaacctg taccggagga acacgtggct gtaccaggca ctgcgggaag
541gcacgcgggt tcagagcgtg gagcagatcc gcgaggtggc ctcgggagcg gcccgcatcc
601gtggggagac gctgggcctc attggctttg gtcgcacggg gcaggcggtt gcagttcgag
661ccaaggcctt tggattcagc gtcatatttt atgaccccta cttgcaggat gggatcgagc
721ggtccctggg cgtgcagagg gtctacaccc tgcaggattt gctgtatcag agcgactgcg
781tctccttgca ctgcaatctc aacgaacata accaccacct catcaatgac tttaccataa
841agcagatgag gcagggagca ttccttgtga acgcagcccg tggcggcctg gtggacgaga
901aagccttagc acaagccctc aaggagggca ggatacgagg ggcagccctc gacgtgcatg
961agtcagagcc cttcagcttt gctcagggtc cgttgaaaga tgccccgaat ctcatctgca
1021ctcctcacac tgcctggtac agtgagcagg cgtcactgga gatgagggag gcagctgcca
1081ccgagatccg ccgagccatc acaggtcgca tcccagaaag cttaagaaat tgtgtgaaca
1141aggaattctt tgtcacatca gcgccttggt cagtaataga ccagcaagca attcatcctg
1201agctcaatgg tgccacatac agatatccgc caggcatcgt gggtgtggct ccaggaggac
1261ttcctgcagc catggaaggg atcatccctg gaggcatccc agtgactcac aacctcccga
1321cagtggcaca tccttcccaa gcgccctctc ccaaccagcc cacaaaacac ggggacaatc
1381gagagcaccc caacgagcaa tnnccaactt tcttgtacaa agttggcatt ataagaaagc
1441attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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