Transcript: Mouse NM_001038655.1

Mus musculus guanine nucleotide binding protein (G protein), gamma 7 (Gng7), transcript variant 1, mRNA.

Source:
NCBI, updated 2017-05-14
Taxon:
Mus musculus (mouse)
Gene:
Gng7 (14708)
Length:
3425
CDS:
219..428

Additional Resources:

NCBI RefSeq record:
NM_001038655.1
NBCI Gene record:
Gng7 (14708)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001038655.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000415814 GCCATTCTAGTTGTCAGTAAA pLKO_005 889 3UTR 100% 13.200 18.480 N Gng7 n/a
2 TRCN0000416666 CCCGGAGGTATTGGTCCAATT pLKO_005 480 3UTR 100% 10.800 15.120 N Gng7 n/a
3 TRCN0000418916 AGCTGGGATCGAACGCATCAA pLKO_005 281 CDS 100% 4.950 6.930 N Gng7 n/a
4 TRCN0000037077 CGCATTGAAGCTGGGATCGAA pLKO.1 273 CDS 100% 3.000 4.200 N Gng7 n/a
5 TRCN0000436122 AGCAACATGCCCGCAACGATC pLKO_005 340 CDS 100% 1.350 1.890 N Gng7 n/a
6 TRCN0000037078 CGCAACGATCCCTTGCTGGTT pLKO.1 351 CDS 100% 0.880 0.704 N Gng7 n/a
7 TRCN0000037075 GCCTCTGAGAATCCATTCAAA pLKO.1 381 CDS 100% 5.625 3.938 N Gng7 n/a
8 TRCN0000037076 CGAACGCATCAAGGTCTCCAA pLKO.1 290 CDS 100% 2.640 1.848 N Gng7 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001038655.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 TRCN0000488795 ACAACACCTGGCAACCAGGGGCAC pLX_317 100% 82.1% 92.7% V5 (not translated due to prior stop codon) (many diffs) n/a
2 TRCN0000489789 AGTCACTTGGGAACTCGTTTGACT pLX_317 100% 81.7% 91.4% V5 (many diffs) n/a
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