Transcript: Human NM_004629.1

Homo sapiens FA complementation group G (FANCG), mRNA.

Source:
NCBI, updated 2019-09-22
Taxon:
Homo sapiens (human)
Gene:
FANCG (2189)
Length:
2649
CDS:
493..2361

Additional Resources:

NCBI RefSeq record:
NM_004629.1
NBCI Gene record:
FANCG (2189)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_004629.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000420095 GTAATCGAGACACTTACTTTC pLKO_005 2129 CDS 100% 10.800 15.120 N FANCG n/a
2 TRCN0000082858 CCTGTGAAATTTGCCCTAGTT pLKO.1 2494 3UTR 100% 4.950 3.960 N FANCG n/a
3 TRCN0000430570 AGACTCTGAAGAGGCTAGATC pLKO_005 2159 CDS 100% 4.950 3.465 N FANCG n/a
4 TRCN0000435712 GAGTCTGGAGCTGCTAGTTGA pLKO_005 1395 CDS 100% 4.950 3.465 N FANCG n/a
5 TRCN0000082860 GCCTCTAAGGATCTGCTGTTA pLKO.1 1009 CDS 100% 4.950 3.465 N FANCG n/a
6 TRCN0000082861 TGAGGAATTAGATGCTCCATT pLKO.1 1056 CDS 100% 4.950 3.465 N FANCG n/a
7 TRCN0000415339 TGCTTCACCATCATTAGGAAT pLKO_005 2427 3UTR 100% 4.950 3.465 N FANCG n/a
8 TRCN0000082862 CCTTGAATGTCCCATGCAGTT pLKO.1 1418 CDS 100% 4.050 2.835 N FANCG n/a
9 TRCN0000082859 GCCAAAGTCTTGTGACCTGTA pLKO.1 2340 CDS 100% 4.050 2.835 N FANCG n/a
10 TRCN0000430933 ACTTGGTTGCAGCCCTGAAAG pLKO_005 1295 CDS 100% 10.800 6.480 N FANCG n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_004629.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 ccsbBroadEn_00539 pDONR223 100% 100% 100% None n/a
2 ccsbBroad304_00539 pLX_304 0% 100% 100% V5 n/a
3 TRCN0000472413 CCGCAATTATGGCTCATTGCTATC pLX_317 17.2% 100% 100% V5 n/a
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