Transcript: Human NM_033259.3

Homo sapiens calcium/calmodulin dependent protein kinase II inhibitor 2 (CAMK2N2), mRNA.

Source:
NCBI, updated 2019-09-27
Taxon:
Homo sapiens (human)
Gene:
CAMK2N2 (94032)
Length:
1452
CDS:
269..508

Additional Resources:

NCBI RefSeq record:
NM_033259.3
NBCI Gene record:
CAMK2N2 (94032)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_033259.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000243331 TGCGTACTTGCATGAGCTTTC pLKO_005 921 3UTR 100% 6.000 8.400 N CAMK2N2 n/a
2 TRCN0000255332 CCGGATAGACGACGTGCTGAA pLKO_005 454 CDS 100% 1.350 1.890 N Camk2n2 n/a
3 TRCN0000243329 AGGGACTTCCTCAGCACATTT pLKO_005 1022 3UTR 100% 13.200 9.240 N CAMK2N2 n/a
4 TRCN0000243330 TGATCGAGGATGACCGGATAG pLKO_005 441 CDS 100% 6.000 4.200 N CAMK2N2 n/a
5 TRCN0000255331 TGATCGAGGATGACCGGATAG pLKO_005 441 CDS 100% 6.000 4.200 N Camk2n2 n/a
6 TRCN0000243333 GTTGAGGCTGGGATGAGACAA pLKO_005 1144 3UTR 100% 4.950 3.465 N CAMK2N2 n/a
7 TRCN0000243332 CCAAGGGCCCAGATCCGATTT pLKO_005 1262 3UTR 100% 3.600 2.520 N CAMK2N2 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_033259.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 TRCN0000487859 GTGGACACCCTATTTCTCCAATAC pLX_317 88.5% 100% 100% V5 (not translated due to prior stop codon) n/a
2 TRCN0000487961 ATCGGCGAGAATGGCTCGTAACCG pLX_317 100% 99.5% 98.7% V5 237_238insG n/a
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