Transcript: Human NR_030754.1

Homo sapiens microRNA 622 (MIR622), microRNA.

Source:
NCBI, updated 2019-07-02
Taxon:
Homo sapiens (human)
Gene:
MIR622 (693207)
Length:
96
CDS:
(non-coding)

Additional Resources:

NCBI RefSeq record:
NR_030754.1
NBCI Gene record:
MIR622 (693207)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the exonic sequence of this non-coding transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NR_030754.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000295655 AGTACTGGTCTCAGCAGATTG pLKO_005 15 3UTR 100% 10.800 5.400 Y Krt18 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NR_030754.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 ccsbBroadEn_06508 pDONR223 100% 7% None (many diffs) n/a
2 ccsbBroad304_06508 pLX_304 0% 7% V5 (many diffs) n/a
3 TRCN0000478565 GGTCTGGTAAACGCTAGTGTGTCC pLX_317 22.6% 7% V5 (many diffs) n/a
4 ccsbBroadEn_06507 pDONR223 100% 7% None (many diffs) n/a
5 ccsbBroad304_06507 pLX_304 0% 7% V5 (many diffs) n/a
6 TRCN0000474389 CTCCAGCCACTGTTTCGGCTACTC pLX_317 41.5% 7% V5 (many diffs) n/a
7 TRCN0000487775 GTTCAACGCCCGGGTGCCGGACCC pLX_317 21.2% 7% V5 (not translated due to prior stop codon) (many diffs) n/a
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