Construct: ORF TRCN0000467798

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014347.1_s317c1
Derived from:
ccsbBroadEn_05053
DNA Barcode:
TCTAAGTAAAGCATAAAATGGTCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTC14 (151613)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000467798
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 151613 TTC14 tetratricopeptide repeat do... NM_133462.4 100% 100%
2 human 151613 TTC14 tetratricopeptide repeat do... XM_017005739.2 93.2% 93.2% 699_700ins156
3 human 151613 TTC14 tetratricopeptide repeat do... NM_001288582.2 81% 74.2% (many diffs)
4 human 151613 TTC14 tetratricopeptide repeat do... XR_427362.4 80.4% 1_99del;1387_1388insAGAAATCTTTGGAATTA;2393_2832del
5 human 151613 TTC14 tetratricopeptide repeat do... XR_001740030.2 78.6% 1_99del;1389_1894del;2897_2898insGGAAATAAGTCAAAAAAT
6 human 151613 TTC14 tetratricopeptide repeat do... XM_024453361.1 67.5% 67.5% 0_1ins750
7 human 151613 TTC14 tetratricopeptide repeat do... XR_001740029.2 61.2% (many diffs)
8 human 151613 TTC14 tetratricopeptide repeat do... XM_017005740.2 56.3% 55.8% 1288_1289insAGAAATCTTTGGAATTA;1302_1303ins991
9 human 151613 TTC14 tetratricopeptide repeat do... NM_001042601.3 55.9% 55.8% (many diffs)
10 mouse 67120 Ttc14 tetratricopeptide repeat do... NM_027619.4 87.1% 86.8% (many diffs)
11 mouse 67120 Ttc14 tetratricopeptide repeat do... XM_006535524.2 84.2% 83.8% (many diffs)
12 mouse 67120 Ttc14 tetratricopeptide repeat do... NM_001290500.1 80.7% 80.4% (many diffs)
13 mouse 67120 Ttc14 tetratricopeptide repeat do... XM_006535522.2 78.1% 77.6% (many diffs)
14 mouse 67120 Ttc14 tetratricopeptide repeat do... XR_880651.2 60.9% (many diffs)
15 mouse 67120 Ttc14 tetratricopeptide repeat do... XM_011249706.2 50.3% 50.1% (many diffs)
16 mouse 67120 Ttc14 tetratricopeptide repeat do... NM_025978.4 50% 51.9% (many diffs)
17 mouse 67120 Ttc14 tetratricopeptide repeat do... XM_011249707.2 48.7% 50.1% (many diffs)
18 mouse 67120 Ttc14 tetratricopeptide repeat do... NM_001290502.1 48.2% 46.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2376
ORF length:
2310
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga ccgggacctt ttgcggcagt cgctaaattg ccacgggtcg tctttgctct
121ctctacttcg gagcgaacag caggacaatc cacacttccg tagcctcctg gggtcggccg
181ccgagccagc ccggggcccg ccgccccagc acccgttgca gggcagaaaa gagaagagag
241ttgacaacat cgagatacag aaattcatct ccaaaaaagc ggatctgctt tttgcacttt
301cctggaaatc agatgcacct gcaacttctg aaattaatga agacagtgaa gatcattatg
361caatcatgcc acctttagag caattcatgg agatacctag tatggatcgg agagagctgt
421ttttccgaga tattgagcgt ggtgatatag tgattggaag aattagttct attcgggaat
481tcggtttttt catggtgttg atctgtttag gaagtggtat catgagagat atagcccact
541tagaaatcac agctctttgt cccttaagag atgtgccttc tcacagtaac catggggatc
601ctttatcata ttaccaaact ggtgacatca ttcgagctgg aatcaaggat attgacagat
661accatgaaaa gctagcagta tctctgtata gctcttctct tccaccacac ctatctggta
721ttaaattagg tgtaattagc tctgaagagc ttcctttata ctacaggaga agtgttgagc
781taaatagcaa ttctttggag tcctatgaaa atgtcatgca gagttccttg ggatttgtta
841atccaggagt agttgaattc cttctagaaa aactaggaat agatgaatct aatccaccat
901ctttaatgag aggcctacaa agcaaaaatt tctctgaaga tgattttgct tctgcattga
961gaaaaaaaca atccgcatct tgggctttaa aatgtgtgaa gatcggagtt gactatttta
1021aagttggacg ccatgtggat gctatgaatg aatacaataa agctttggaa atagacaaac
1081aaaacgtgga agctttggta gctcgtggag cattatatgc gacaaaagga agtttgaaca
1141aagcaataga agattttgag cttgcattag aaaactgtcc aactcacaga aatgcaagaa
1201aatacctctg ccagacactt gtagagagag gaggacagtt agaagaagaa gaaaagtttt
1261taaatgctga aagttactat aagaaagctt tggctttgga tgagactttt aaagatgcag
1321aggatgcttt gcagaaactt cataaatata tgcagaaatc tttggaatta agagaaaaac
1381aagctgaaaa ggaagaaaag cagaaaacaa agaaaataga aacaagtgca gaaaagttgc
1441gtaagctctt aaaagaagag aagaggctaa agaagaaaag aagaaaatca acttcttctt
1501caagtgtttc ttctgctgat gaatcagtgt cttcatcatc atcctcttcc tcttctggtc
1561acaaaaggca taagaaacat aagaggaacc gttcagagtc ttctcgcagt tccagaaggc
1621attcatctag ggcatcctca aatcagatag atcagaatag gaaagatgag tgctacccag
1681ttccagctaa tacttcagca tcttttctta accataaaca agaagtggag aaactactgg
1741ggaagcagga taggttacag tatgaaaaga cacagataaa agagaaagat agatgccctc
1801tctcttcatc ttcacttgaa ataccggatg attttggagg taggtctgaa gatccaagag
1861atttttataa cagctataaa acccaagcag gtagtagcaa aacagaaaag ccatataaat
1921cagaaagaca tttttccagt agaagaaatt ccTCAGATTC CTTCTGTAGG AATTCAGAGG
1981ACAAGATTTA TGGTTATAGG AGATTTGAAA AGGATATAGA GGGAAGAAAA GAGCACTATA
2041GAAGGTGGGA ACCAGGTTCT GTGAGGCATT CTACCTCACC AGCAAGCTCA GAATACTCTT
2101GGAAGTCAGT TGAGAAATAC AAAAAATACG CTCACTCTGG ATCACGTGAT TTCAGTAGAC
2161ATGAGCAAAG ATACCGTTTA AATACAAATC AAGGAGAATA TGAAAGAGAG GACAATTATG
2221GGGAGGATAT CAAAACAGAG GTTCCAGAAG AAGATGCACT AAGTAGCAAA GAACACTCAG
2281AAAGCAGTGT TAAGAAAAAT TTACCTCAGA ATTTACTGAA TATATTTAAT CAGATAGCTG
2341AATTTGAAAA AGAAAAAGGA AATAAGTCAA AAAATTACCC AACTTTCTTG TACAAAGTGG
2401TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
2461CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
2521ATCTAAGTAA AGCATAAAAT GGTCCACGCG TTAAGTCgac aatcaacctc tggattacaa
2581aatttgtgaa agatt

Download FASTA (ORF) (Full)