Construct: ORF TRCN0000469255

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006329.1_s317c1
Derived from:
ccsbBroadEn_11404
DNA Barcode:
GCAGAAGTTCGCACTTAGGCTCTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BZW1 (9689)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469255
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9689 BZW1 basic leucine zipper and W2... NM_001207067.2 99.9% 100% 415T>C
2 human 9689 BZW1 basic leucine zipper and W2... NM_001321688.2 99.9% 100% 415T>C
3 human 9689 BZW1 basic leucine zipper and W2... NM_001321690.1 99.9% 100% 415T>C
4 human 9689 BZW1 basic leucine zipper and W2... NM_001207069.1 98.9% 99% 1_12del;427T>C
5 human 9689 BZW1 basic leucine zipper and W2... NM_001207068.3 92.8% 92.9% 1_96del;511T>C
6 human 9689 BZW1 basic leucine zipper and W2... NM_001321691.2 91.8% 91.8% 415T>C;1000_1001ins102
7 human 9689 BZW1 basic leucine zipper and W2... NM_001321693.2 85.8% 85.9% 63_64ins177;238T>C
8 human 9689 BZW1 basic leucine zipper and W2... NM_014670.3 84.1% 84.2% 415T>C;853_854ins198
9 human 9689 BZW1 basic leucine zipper and W2... NM_001321694.2 79.8% 74.4% 0_1ins163;81_82ins89;163T>C
10 human 9689 BZW1 basic leucine zipper and W2... XM_017005393.1 79.7% 74.2% (many diffs)
11 mouse 66882 Bzw1 basic leucine zipper and W2... NM_025824.3 92.6% 100% (many diffs)
12 mouse 66882 Bzw1 basic leucine zipper and W2... XM_006496197.3 86.1% 92.9% (many diffs)
13 mouse 66882 Bzw1 basic leucine zipper and W2... XM_017322066.1 73.3% 73.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1323
ORF length:
1257
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa taatcaaaag cagcaaaagc caacgctatc aggccagcgt tttaaaacta
121gaaaaagaga tgaaaaagag aggtttgacc ctactcagtt tcaagactgt attattcaag
181gcttaactga aaccggtact gatttggaag cagtagctaa gtttcttgat gcttctggag
241caaaacttga ttaccgtcga tatgcagaaa cactctttga cattctggtg gctggtggaa
301tgctggcccc aggtggtaca ctggcagatg acatgatgcg tacagatgtc tgcgtgtttg
361cagcccaaga agatctagag accatgcaag catttgctca ggtttttaac aagttaatca
421ggcgctacaa atacctggag aaaggttttg aagatgaagt aaaaaagctg ctgctgttcc
481tgaagggttt ttcagagtcg gagaggaaca agctagctat gttgactggt gttcttctgg
541ctaatggaac acttaatgca tccattctta atagccttta taatgaaaat ttggttaaag
601aaggagtttc agcagctttt gctgtgaagc tctttaaatc atggataaat gaaaaagata
661tcaatgcagt agctgcaagt cttcggaaag tcagcatgga taacagactg atggaactct
721ttcctgccaa taagcaaagt gttgaacact tcacaaaata ttttactgag gcaggcttga
781aagagctttc agaatatgtt cggaatcagc aaaccatcgg agctcGTAAG GAGCTCCAGA
841AAGAACTTCA AGAACAGATG TCCCGTGGTG ATCCATTTAA GGATATAATT TTATATGTCA
901AGGAGGAGAT GAAAAAAAAC AACATCCCAG AGCCAGTTGT CATCGGAATA GTCTGGTCAA
961GTGTAATGAG CACTGTGGAA TGGAACAAAA AAGAGGAGCT TGTAGCAGAG CAAGCCATCA
1021AGCACTTGAA GCAATACAGC CCTCTACTTG CTGCCTTTAC TACTCAAGGT CAGTCTGAGC
1081TGACTCTGTT ACTGAAGATT CAGGAGTATT GCTATGACAA CATTCATTTC ATGAAAGCCT
1141TCCAGAAAAT AGTGGTGCTT TTTTATAAAG CTGAAGTCCT GAGCGAGGAG CCCATTTTGA
1201AGTGGTATAA AGATGCACAT GTTGCAAAGG GGAAGAGTGT TTTCCTTGAG CAAATGAAAA
1261AGTTTGTAGA ATGGCTCAAA AATGCTGAAG AAGAATCTGA ATCTGAAGCT GAAGAAGGTG
1321ACTGCCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC
1381TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT
1441GGCTTTATAT ATCTTGTGGA AAGGACGAGC AGAAGTTCGC ACTTAGGCTC TGACGCGTTA
1501AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)

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