Construct: ORF TRCN0000469755

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007028.1_s317c1
Derived from:
ccsbBroadEn_11283
DNA Barcode:
CCACTTGTTCCCCGACCCCATAAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLF7 (8609)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469755
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8609 KLF7 Kruppel like factor 7 NM_001270942.1 100% 100%
2 human 8609 KLF7 Kruppel like factor 7 XM_017005164.2 100% 100%
3 human 8609 KLF7 Kruppel like factor 7 XM_011512075.2 76.1% 64.9% (many diffs)
4 human 8609 KLF7 Kruppel like factor 7 XM_017005163.2 76.1% 64.9% (many diffs)
5 human 8609 KLF7 Kruppel like factor 7 NM_003709.4 76.1% 58.1% 530_731del;893_906del
6 human 8609 KLF7 Kruppel like factor 7 XM_017005161.1 76.1% 58.1% 530_731del;893_906del
7 human 8609 KLF7 Kruppel like factor 7 XM_005246926.3 75.9% 57.9% 532_736del;896_909del
8 human 8609 KLF7 Kruppel like factor 7 XM_006712815.3 75.9% 57.9% 532_736del;896_909del
9 human 8609 KLF7 Kruppel like factor 7 XM_011512072.2 75.9% 57.9% 532_736del;896_909del
10 human 8609 KLF7 Kruppel like factor 7 NM_001270944.1 66.1% 47.7% (many diffs)
11 human 8609 KLF7 Kruppel like factor 7 XM_017005162.1 65.8% 47.6% (many diffs)
12 human 8609 KLF7 Kruppel like factor 7 XM_011512073.2 65.4% 47.6% (many diffs)
13 human 8609 KLF7 Kruppel like factor 7 NM_001270943.2 65% 47.4% (many diffs)
14 human 8609 KLF7 Kruppel like factor 7 XM_011512074.2 64.8% 47.3% (many diffs)
15 human 8609 KLF7 Kruppel like factor 7 XM_024453196.1 64.8% 47.3% (many diffs)
16 human 8609 KLF7 Kruppel like factor 7 XR_923051.2 36% (many diffs)
17 human 8609 KLF7 Kruppel like factor 7 XR_001739009.2 10% (many diffs)
18 mouse 93691 Klf7 Kruppel-like factor 7 (ubiq... NM_033563.2 71.6% 56.9% (many diffs)
19 mouse 93691 Klf7 Kruppel-like factor 7 (ubiq... XM_006496354.3 71.6% 56.9% (many diffs)
20 mouse 93691 Klf7 Kruppel-like factor 7 (ubiq... XM_006496351.3 71.4% 56.7% (many diffs)
21 mouse 93691 Klf7 Kruppel-like factor 7 (ubiq... XM_006496352.3 71.4% 56.7% (many diffs)
22 mouse 93691 Klf7 Kruppel-like factor 7 (ubiq... XM_006496353.2 71.4% 56.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
756
ORF length:
690
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga cgtgttggct agttatagta tattccagga gctacaactt gtccacgaca
121ccggctactt ctcagcttta ccatccctgg aggagacctg gcagcagaca tgccttgaat
181tggaacgcta cctacagacg gagccccgga ggatctcaga gacctttggt gaggacttgg
241actgtttcct ccacgcttcc cctcccccgt gcattgagga aagcttccgt cgcttagacc
301ccctgctgct ccccgtggaa gcggccatct gtgagaagag ctcggcagtg gacatcttgc
361tctctcggga caagttgcta tctgagacct gccTCAGCCT CCAGCCGGCC AGCTCTTCTC
421TAGACAGCTA CACAGCCGTC AACCAGGCCC AGCTCAACGC AGTGACCTCA TTAACGCCCC
481CATCGTCCCC TGAGCTCAGC CGCCATCTGG TCAAAACCTC ACAAACTCTC TCTGCCGTGG
541ATGGCACGGT GACGTTGAAA CTGGTGGCCA AGAAGGCTGC TCTCAGCTCC GTAAAGGTGA
601GAAGCCTTAT AAGTGCTCAT GGGAGGGATG TGAGTGGCGT TTTGCACGAA GCGATGAGCT
661CACGAGGCAC TACAGGAAAC ACACAGGTGC AAAGCCCTTC AAATGCAACC ACTGCGACAG
721GTGTTTTTCC AGGTCTGACC ATCTTGCCCT CCACATGCCC AACTTTCTTG TACAAAGTGG
781TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
841CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
901ACCACTTGTT CCCCGACCCC ATAAGACGCG TTAAGTCgac aatcaacctc tggattacaa
961aatttgtgaa agatt

Download FASTA (ORF) (Full)