Construct: ORF TRCN0000470092

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008845.1_s317c1
Derived from:
ccsbBroadEn_08732
DNA Barcode:
GCTGGTGTTTCCAAGGCATACGTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF512B (57473)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470092
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57473 ZNF512B zinc finger protein 512B NM_020713.3 99.9% 100% 1314A>C
2 human 57473 ZNF512B zinc finger protein 512B XM_024451953.1 98.4% 98.4% 1_42del;1356A>C
3 human 57473 ZNF512B zinc finger protein 512B XM_011528930.2 94.7% 94.8% 1_42del;1356A>C;2368_2369ins99
4 human 57473 ZNF512B zinc finger protein 512B XM_024451951.1 83.3% 83.3% 1314A>C;2327_2860del
5 human 57473 ZNF512B zinc finger protein 512B XM_024451952.1 83.3% 83.3% 1314A>C;2327_2860del
6 human 57473 ZNF512B zinc finger protein 512B XM_024451950.1 82.2% 82.2% 1_42del;1356A>C;2369_2902del
7 human 57473 ZNF512B zinc finger protein 512B XM_024451954.1 52.3% 52% (many diffs)
8 human 57473 ZNF512B zinc finger protein 512B XM_024451955.1 52.1% 51.7% (many diffs)
9 human 57473 ZNF512B zinc finger protein 512B XM_011528933.2 49.4% 46.5% (many diffs)
10 mouse 269401 Zfp512b zinc finger protein 512B NM_001164597.1 83.2% 85.8% (many diffs)
11 mouse 269401 Zfp512b zinc finger protein 512B XM_006500647.3 83.2% 85.8% (many diffs)
12 mouse 269401 Zfp512b zinc finger protein 512B XM_006500650.3 49.8% 50.3% (many diffs)
13 mouse 269401 Zfp512b zinc finger protein 512B XM_011239943.2 49.7% 50.1% (many diffs)
14 mouse 269401 Zfp512b zinc finger protein 512B XR_375397.3 46% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2745
ORF length:
2676
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gacggatcct ttctgcgttg gaggccgtcg gctcccgggg tccagcaaga
121gtggtcccgg gaaggatggc agccgaaagg aggtccgact tccaatgctg catgacccac
181cgaagatggg gatgccggtg gtccgtggtg gacagacagt gcccggccag gcccctctct
241gctttgaccc gggaagtcca gccagtgaca agacagaagg gaagaaaaag gggcggccaa
301aagccgagaa ccaggccctc cgagacattc ctctctccct gatgaacgac tggaaggatg
361agttcaaggc acactcgagg gtgaagtgtc caaactcagg gtgctggctg gagttcccca
421gcatctacgg gctcaagtac cattaccagc ggtgccaagg gggtgccatc tcagatcgcc
481tggccttccc ctgccccttc tgcgaggccg cattcacctc taagacccag ctggagaaac
541accggatctg gaaccacatg gaccgacccc tgcctgcctc caagcctggg cccatcagca
601ggccggtcac catcagccgg cctgttgggg tcagcaagcc catcggagtg agcaaacctg
661tcactattgg caaacctgtg ggtgtcagca aacccattgg catcagcaag ccagtctcgg
721tcggcagacc catgccagtc accaaggcca tcccggtcac taggcccgtg ccagtcacca
781aacctgtcac agtcagcagg cccatgcccg tcaccaaggc catgccggtc accaaaccca
841tcacagtcac caagtctgtg ccggtcacca aacccgtacc tgtcaccaaa cccattacgg
901taacaaagct tgtgacagtt acgaaacccg tgccggtcac caagccagtg acagtcagca
961ggcccattgt ggtcagcaag ccggtgacag tcagcaggcc cattgctatc agcagacaca
1021caccgccctg caaaatggtg ctgctgacca ggtcggagaa caaagcacct cgtgccacag
1081ggaggaacag tggtaagaaa agggctgcgg acagcctgga cacctgccca attccaccca
1141agcaggccag gccagagaat ggggagtacg gcccctcctc catgggccag agctcggcct
1201tccagctgag tgcagacacc agcagtggct ccttgtcgcc aggcagcagg ccgtcagggg
1261gcatggaggc actgaaggct gcaggccctg cgtccccgcc tgaggaggac ccggagcgca
1321caaagcacag aaggaaacag aaaacaccca aaaagtttac aggggagcag ccatccatct
1381ccgggacctt tgggctcaaa ggcctggtca aagctgagga caaggcccga gttcaccgct
1441ccaagaagca ggaggggcca ggccctgagg acgcccggaa gaaggtgcca gctgccccca
1501tcactgtcag caaggaggca ccggcccctg tggcccaccc agctccaggt ggccctgaag
1561agcagtggca gagggccatc catgagcgcg gggaagccgt ctgccccacc tgcaacgtgg
1621tcacccggaa gactctcgtg gggcttaaga agcacatgga ggtgtgtcag aagcttcagg
1681atgcactcaa gtgccagcac tgccggaagc agttcaagtc caaagccggc ctcaactacc
1741acactatggc cgagcacagt gccaagccct ctgacgccga ggcctccgaa gggggcgagc
1801aggaggagcg cgagaggctg cgcaaggtgc tgaagcagat gggacggctg cgctgccccc
1861aggagggttg cggggctgcc ttctccagcc tcatgggcta ccagtaccac cagcggcgct
1921gcgggaagcc gccctgcgag gtggacagcc cctccttccc ctgcacccac tgtggcaaga
1981cgtaccgatc caaggctggc cacgactacc acgtgcgctc ggagcacacg gccccccccc
2041ctgaggagcc cacagacaag tcccctgagg ctgaggaccc gctgggtgtg gagcggaccc
2101caagcgggcg tgtccgccgc acgtcggccc aggtggcggt gttccacctg caggagatag
2161cggaggacga gctggcccgc gactggacca agcggcgcat gaaggatgac cttgtgcccg
2221agaccgcacg gctcaactac actcgaccag ggcTCCCCAC GCTGAACCCC CAGCTGCTAG
2281AGGCATGGAA GAATGAAGTG AAGGAGAAAG GCCACGTCAA CTGTCCCAAC GACTGCTGTG
2341AAGCCATCTA CTCCAGCGTG TCCGGACTCA AGGCTCATCT CGCCAGCTGC AGTAAGGGGG
2401CCCACCTGGC AGGGAAGTAC CGCTGTCTGC TGTGTCCGAA GGAGTTCAGT TCTGAGAGTG
2461GCGTCAAATA CCACATCCTG AAGACCCACG CAGAGAACTG GTTCCGAACA TCAGCAGACC
2521CACCTCCCAA ACACAGGAGC CAGGACTCAT TGGTGCCCAA GAAGGAAAAG AAGAAAAATC
2581TGGCAGGTGG AAAGAAGCGG GGCCGAAAGC CCAAGGAGCG GACCCCAGAG GAGCCTGTGG
2641CCAAGCTGCC CCCGCGCCGG GACGACTGGC CTCCAGGATG CAGAGACAAG GGGGCCCGGG
2701GCTCCACCGG CCGGAAGGTG GGAGTCAGCA AGGCGCCTGA AAAGTTGCCA ACTTTCTTGT
2761ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
2821AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
2881GAAAGGACGA GCTGGTGTTT CCAAGGCATA CGTTACGCGT TAAGTCgaca atcaacctct
2941ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)

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