Construct: ORF TRCN0000471457

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014237.1_s317c1
Derived from:
ccsbBroadEn_01722
DNA Barcode:
GGCTCTGTTACACGCCGCCTATAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAJC7 (7266)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471457
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7266 DNAJC7 DnaJ heat shock protein fam... NM_001144766.2 100% 100%
2 human 7266 DNAJC7 DnaJ heat shock protein fam... XM_011525167.3 100% 100%
3 human 7266 DNAJC7 DnaJ heat shock protein fam... XM_011525168.3 100% 100%
4 human 7266 DNAJC7 DnaJ heat shock protein fam... XM_011525169.3 100% 100%
5 human 7266 DNAJC7 DnaJ heat shock protein fam... XM_017024994.2 100% 100%
6 human 7266 DNAJC7 DnaJ heat shock protein fam... NM_003315.4 88.6% 88.6% 1_168del
7 human 7266 DNAJC7 DnaJ heat shock protein fam... XR_001752602.2 69.7% 1_195del;1037_1136del;1610_1885del
8 human 7266 DNAJC7 DnaJ heat shock protein fam... NR_029431.1 65.4% 1_360del;1675_2007del
9 human 7266 DNAJC7 DnaJ heat shock protein fam... XR_001752603.2 58.9% (many diffs)
10 mouse 56354 Dnajc7 DnaJ heat shock protein fam... XM_011249154.2 84.3% 89.7% (many diffs)
11 mouse 56354 Dnajc7 DnaJ heat shock protein fam... NM_019795.4 81.5% 86.8% (many diffs)
12 mouse 56354 Dnajc7 DnaJ heat shock protein fam... XR_001780034.1 63.1% (many diffs)
13 mouse 56354 Dnajc7 DnaJ heat shock protein fam... XR_001780033.1 54.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1380
ORF length:
1314
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtg tcctaaaaat gctagctatt atggtaatcg agcagccacc ttgatgatgc
121ttggaaggtt ccgggaagct cttggagatg cacaacagtc agtgaggttg gatgacagtt
181ttgtccgggg acatctacga gagggcaagt gccacctctc tctggggaat gccatggcag
241catgtcgcag cttccagaga gccctagaac tggatcataa aaatgctcag gcacaacaag
301agttcaagaa tgctaatgca gtcatggaat atgagaaaat agcagaaaca gattttgaga
361agcgagattt tcggaaggtt gttttctgca tggaccgtgc cctagaattt gcccctgcct
421gccatcgctt caaaatcctc aaggcagaat gtttagcaat gctgggtcgt tatccagaag
481cacagtctgt ggctagtgac attctacgaa tggattccac caatgcagat gctctgtatg
541tacgaggtct ttgcctttat tacgaagatt gtattgagaa ggcagttcag tttttcgtac
601aggctctcag gatggctcct gaccacgaga aggcctgcat tgcctgcaga aatgccaaag
661cactcaaagc aaagaaagaa gatgggaata aagcatttaa ggaaggaaat tacaaactag
721catatgaact gtacacagaa gccctgggga tagaccccaa caatataaaa acaaatgcta
781aactctactg taatcggggt acggttaatt ccaagcttag gaaactagat gatgcaatag
841aagactgcac aaatgcagtg aagcttgatg acacttacat aaaagcctac ttgagaagag
901ctcagtgtta catggacaca gaacagtatg aagaagcagt acgagactat gaaaaagtat
961aCCAGACAGA GAAAACAAAA GAACACAAAC AGCTCCTAAA AAATGCGCAG CTGGAACTGA
1021AGAAGAGTAA GAGGAAAGAT TACTACAAGA TTCTAGGAGT GGACAAGAAT GCCTCTGAGG
1081ACGAGATCAA GAAAGCTTAT CGGAAACGGG CCTTGATGCA CCATCCAGAT CGGCATAGTG
1141GAGCCAGTGC TGAGGTTCAG AAGGAGGAGG AGAAGAAGTT CAAGGAAGTT GGAGAGGCCT
1201TTACTATCCT CTCTGATCCC AAGAAAAAGA CTCGCTATGA CAGTGGACAG GACCTAGATG
1261AGGAGGGCAT GAATATGGGT GATTTTGATC CAAACAATAT CTTCAAGGCA TTCTTTGGCG
1321GTCCTGGCGG CTTCAGCTTT GAAGCATCTG GTCCAGGGAA TTTCTTTTTT CAATTTGGCT
1381ACCTAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1441GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1501TTTATATATC TTGTGGAAAG GACGAGGCTC TGTTACACGC CGCCTATATA CGCGTTAAGT
1561Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)