Construct: ORF TRCN0000471524

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017589.1_s317c1
Derived from:
ccsbBroadEn_10459
DNA Barcode:
TTTACTACCAGAGTAGATCTTTTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EVL (51466)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471524
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51466 EVL Enah/Vasp-like NM_001330221.2 100% 100%
2 human 51466 EVL Enah/Vasp-like NM_016337.3 99.5% 99.2% 4_9delGCCACA
3 human 51466 EVL Enah/Vasp-like XM_005267749.3 98.4% 98.3% 1_19delinsA;21C>G
4 human 51466 EVL Enah/Vasp-like XM_011536828.2 80.2% 73.3% (many diffs)
5 human 51466 EVL Enah/Vasp-like XM_017021363.2 79.3% 65.4% (many diffs)
6 human 51466 EVL Enah/Vasp-like XR_001750362.1 48.4% (many diffs)
7 human 51466 EVL Enah/Vasp-like XR_001750364.1 35% (many diffs)
8 human 51466 EVL Enah/Vasp-like XR_001750366.1 34.6% (many diffs)
9 human 51466 EVL Enah/Vasp-like XR_001750361.1 34.2% (many diffs)
10 human 51466 EVL Enah/Vasp-like XR_001750356.1 33.9% (many diffs)
11 human 51466 EVL Enah/Vasp-like XR_001750359.2 33.4% (many diffs)
12 human 51466 EVL Enah/Vasp-like XR_001750367.1 33.2% (many diffs)
13 human 51466 EVL Enah/Vasp-like XR_001750357.2 31.5% (many diffs)
14 human 51466 EVL Enah/Vasp-like XR_001750360.1 29.6% (many diffs)
15 human 51466 EVL Enah/Vasp-like XR_001750363.1 29.6% (many diffs)
16 human 51466 EVL Enah/Vasp-like XR_001750355.1 28.7% (many diffs)
17 human 51466 EVL Enah/Vasp-like XR_002957557.1 28.1% (many diffs)
18 mouse 14026 Evl Ena-vasodilator stimulated ... NM_001163394.1 89.4% 93.9% (many diffs)
19 mouse 14026 Evl Ena-vasodilator stimulated ... XM_006515471.1 88.9% 93% (many diffs)
20 mouse 14026 Evl Ena-vasodilator stimulated ... XM_006515470.1 88% 92.4% (many diffs)
21 mouse 14026 Evl Ena-vasodilator stimulated ... NM_001163396.2 86.4% 90.8% (many diffs)
22 mouse 14026 Evl Ena-vasodilator stimulated ... NM_007965.3 84.4% 88.9% (many diffs)
23 mouse 14026 Evl Ena-vasodilator stimulated ... NM_001163395.1 83% 87.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1314
ORF length:
1248
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag tgaacagagt atctgccaag cccgggcttc cgtgatggtc tacgatgaca
121ccagtaagaa atgggtacca atcaaacctg gccagcaggg attcagccgg atcaacatct
181accacaacac tgccagcaac accttcagag tcgttggagt caagttgcag gatcagcagg
241ttgtgatcaa ttattcaatc gtgaaagggc tgaagtacaa tcaggccacg ccaaccttcc
301accagtggcg agatgcccgc caggtctacg gcttaaactt tgcaagtaaa gaagaggcaa
361ccacgttctc caatgcaatg ctgtttgccc tgaacatcat gaattcccaa gaaggaggcc
421cctccagcca gcgtcaggtg cagaatggcc cctctcctga tgagatggac atccagagaa
481gacaagtgat ggagcagcac cagcagcagc gtcaggaatc tctagaaaga agaacctcgg
541ccacagggcc catcctccca ccaggacatc cttcatctgc agccagcgcc cccgtctcat
601gtagtgggcc tccaccgccc cccccacccc cagtcccacc tccacccact ggggctaccc
661cacctccccc acccccactg ccagccggag gagcccaggg gtccagccac gacgagagct
721ccatgtcagg actggccgct gccatagctg gggccaagct gagaagagtc caacggccag
781aagacgcatc tggaggctcc agtcccagtg ggacctcaaa gtccgatgcc aaccgggcaa
841gcagcggggg tggcggagga ggcctcatgg aggaaatgaa caaactgctg gccaagagga
901gaaaagcagc ctcccagtca gacaagccag ccgagaagaa ggaagatgaa agccaaatgg
961aagatcctag tacctccccc tctccgggga cccgagcagc cagccagcca cctaactcct
1021cagaggctgg ccggaagccc tgggagcgga gcaactcggt ggagaagcct gtgtcctcga
1081ttctgtccag aaccccGTCT GTGGCAAAGA GCCCCGAAGC TAAGAGCCCC CTTCAGTCGC
1141AGCCTCACTC TAGGATGAAG CCTGCTGGGA GCGTGAATGA CATGGCCCTG GATGCCTTCG
1201ACTTGGACCG GATGAAGCAG GAGATCCTAG AGGAGGTGGT GAGAGAGCTC CACAAGGTGA
1261AGGAGGAGAT CATCGACGCC ATCAGGCAGG AGCTGAGTGG GATCAGCACC ACGTACCCAA
1321CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1381ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1441TATCTTGTGG AAAGGACGAT TTACTACCAG AGTAGATCTT TTTACGCGTT AAGTCgacaa
1501tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)

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