Construct: ORF TRCN0000472499

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018991.3_s317c1
Derived from:
ccsbBroadEn_14641
DNA Barcode:
CTCTCTAATATTTACACGCAAGGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FGR (2268)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472499
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2268 FGR FGR proto-oncogene, Src fam... NM_001042729.2 100% 100%
2 human 2268 FGR FGR proto-oncogene, Src fam... NM_001042747.1 100% 100%
3 human 2268 FGR FGR proto-oncogene, Src fam... NM_005248.3 100% 100%
4 human 2268 FGR FGR proto-oncogene, Src fam... XM_006710452.2 100% 100%
5 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541010.1 100% 100%
6 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541011.2 86.9% 82.6% 226_227ins103;325_326ins104
7 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541012.2 77.5% 70.1% 1093_1094ins154;1230_1231ins203
8 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541013.3 66.5% 64.6% 1017_1018insGGCA;1056_1057ins527
9 human 2268 FGR FGR proto-oncogene, Src fam... XR_946583.3 65.6% 1_196del;1213_1214insGGCA;1780_2407del
10 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541014.3 61.4% 61.4% 0_1ins612
11 human 2268 FGR FGR proto-oncogene, Src fam... XM_017000673.1 61.4% 61.4% 0_1ins612
12 human 2268 FGR FGR proto-oncogene, Src fam... XM_017000674.1 61.4% 61.4% 0_1ins612
13 mouse 14191 Fgr FGR proto-oncogene, Src fam... NM_010208.4 82.8% 84.1% (many diffs)
14 mouse 14191 Fgr FGR proto-oncogene, Src fam... XM_006538544.3 82.8% 84.1% (many diffs)
15 mouse 14191 Fgr FGR proto-oncogene, Src fam... XM_006538545.3 82.8% 84.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1656
ORF length:
1587
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gggctgtgtg ttctgcaaga aattggagcc ggtggccacg gccaaggagg
121atgctggcct ggaaggggac ttcagaagct acggggcagc agaccactat gggcctgacc
181ccactaaggc ccggcctgca tcctcatttg cccacatccc caactacagc aacttctcct
241ctcaggccat caaccctggc ttccttgata gtggcaccat caggggtgtg tcagggattg
301gggtgaccct gttcattgcc ctgtatgact atgaggctcg aactgaggat gacctcacct
361tcaccaaggg cgagaagttc cacatcctga acaatactga aggtgactgg tgggaggctc
421ggtctctcag ctccggaaaa actggctgca ttcccagcaa ctacgtggcc cctgttgact
481caatccaagc tgaagagtgg tactttggaa agattgggag aaaggatgca gagaggcagc
541tgctttcacc aggcaacccc cagggggcct ttctcattcg ggaaagcgag accaccaaag
601gtgcctactc cctgtccatc cgggactggg atcagaccag aggcgatcat gtgaagcatt
661acaagatccg caaactggac atgggcggct actacatcac cacacgggtt cagttcaact
721cggtgcagga gctggtgcag cactacatgg aggtgaatga cgggctgtgc aacctgctca
781tcgcgccctg caccatcatg aagccgcaga cgctgggcct ggccaaggac gcctgggaga
841tcagccgcag ctccatcacg ctggagcgcc ggctgggcac cggctgcttc ggggatgtgt
901ggctgggcac gtggaacggc agcactaagg tggcggtgaa gacgctgaag ccgggcacca
961tgtccccgaa ggccttcctg gaggaggcgc aggtcatgaa gctgctgcgg cacgacaagc
1021tggtgcagct gtacgccgtg gtgtcggagg agcccatcta catcgtgacc gagttcatgt
1081gtcacggcag cttgctggat tttctcaaga acccagaggg ccaggatttg aggctgcccc
1141aattggtgga catggcagcc caggtagctg agggcatggc ctacatggaa cgcatgaact
1201acattcaccg cgacctgagg gcagccaaca TCCTGGTTGG GGAGCGGCTG GCGTGCAAGA
1261TCGCAGACTT TGGCTTGGCG CGTCTCATCA AGGACGATGA GTACAACCCC TGCCAAGGTT
1321CCAAGTTCCC CATCAAGTGG ACAGCCCCAG AAGCTGCCCT CTTTGGCAGA TTCACCATCA
1381AGTCAGACGT GTGGTCCTTT GGGATCCTGC TCACTGAGCT CATCACCAAG GGCCGAATCC
1441CCTACCCAGG CATGAATAAA CGGGAAGTGT TGGAACAGGT GGAGCAGGGC TACCACATGC
1501CGTGCCCTCC AGGCTGCCCA GCATCCCTGT ACGAGGCCAT GGAACAGACC TGGCGTCTGG
1561ACCCGGAGGA GAGGCCTACC TTCGAGTACC TGCAGTCCTT CCTGGAGGAC TACTTCACCT
1621CCGCTGAACC ACAGTACCAG CCCGGGGATC AGACACCAAC TTTCTTGTAC AAAGTGGTTG
1681ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1741GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGACT
1801CTCTAATATT TACACGCAAG GTACGCGTTA AGTCgacaat caacctctgg attacaaaat
1861ttgtgaaaga tt

Download FASTA (ORF) (Full)