Construct: ORF TRCN0000472641

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012957.1_s317c1
Derived from:
ccsbBroadEn_05196
DNA Barcode:
TAACTCGCTGGCCTCAAAGCATTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FLCN (201163)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472641
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 201163 FLCN folliculin NM_144606.7 100% 100%
2 human 201163 FLCN folliculin XM_011523719.3 58.6% 56.4% (many diffs)
3 human 201163 FLCN folliculin NM_001353230.2 54.4% 52.4% (many diffs)
4 human 201163 FLCN folliculin NM_001353231.2 54.4% 52.4% (many diffs)
5 human 201163 FLCN folliculin NM_144997.7 54.4% 52.4% (many diffs)
6 human 201163 FLCN folliculin XM_017024308.1 54.4% 52.4% (many diffs)
7 human 201163 FLCN folliculin NM_001353229.2 52.8% 50.8% (many diffs)
8 human 201163 FLCN folliculin XM_011523714.3 52.8% 50.8% (many diffs)
9 human 201163 FLCN folliculin XM_011523718.3 52.8% 50.8% (many diffs)
10 human 201163 FLCN folliculin XM_011523721.3 52.8% 50.8% (many diffs)
11 human 201163 FLCN folliculin XM_017024305.2 52.8% 50.8% (many diffs)
12 human 201163 FLCN folliculin XM_024450635.1 52.8% 50.8% (many diffs)
13 human 201163 FLCN folliculin XR_001752445.2 42.8% (many diffs)
14 human 201163 FLCN folliculin XM_017024309.2 41.9% 39.6% (many diffs)
15 mouse 216805 Flcn folliculin NM_001271356.1 51.7% 49.6% (many diffs)
16 mouse 216805 Flcn folliculin NM_001271357.1 51.7% 49.6% (many diffs)
17 mouse 216805 Flcn folliculin NM_146018.2 51.7% 49.6% (many diffs)
18 mouse 216805 Flcn folliculin XM_011248905.2 51.7% 49.6% (many diffs)
19 mouse 216805 Flcn folliculin XR_879567.2 25.5% (many diffs)
20 mouse 216805 Flcn folliculin NR_073164.1 24% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1092
ORF length:
1026
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa tgccatcgtg gctctctgcc acttctgcga gctccacggc ccccgcactc
121tcttctgcac ggaggtgctg cacgccccac ttcctcaagg ggatgggaat gaggacagtc
181ctggccaggg tgagcaggcg gaagaagagg aaggtggcat tcagatgaac agtcggatgc
241gtgcgcacag ccccgcagag ggggccagcg tcgagtccag cagcccgggg cccaaaaagt
301cggacatgtg cgagggctgc cggtcacttg ctgcagggca cccgggatat atcagccatg
361ataaagagac ctccattaaa tacgtcagcc accagcaccc cagccacccc cagctcttca
421gcattgtccg ccaggcctgt gtccggagcc tgagctgtga ggtctgccct ggccgtgaag
481gccccatctt cttcggagat gagcagcacg gctttgtgtt cagccacacc ttcttcatca
541aggacagcct ggccaggggc ttccagcgct ggtacagcat catcaccatc atgatggacc
601ggatctacct catcaactcc tggcccttcc tgctggggaa ggtccgggga atcatcgatg
661agctccaggg caaggcgctc aaggtgttTG AGGCAGAGCA GTTTGGATGC CCACAGCGTG
721CTCAGAGGAT GAACACAGCC TTCACGCCAT TCCTACACCA GAGGAACGGC AACGCCGCCC
781GCTCGCTGAC ATCGCTGACA AGTGATGACA ACCTGTGGGC GTGCCTGCAC ACCTCCTTTG
841CCTGGCTCCT GAAGGCGTGT GGCAGCCGGC TGACCGAGAA GCTCCTGGAA GGTGCTCCGA
901CCGAGGATAC CTTGGTCCAG ATGGAGAAGC TCGCTGGTGA GGCAGGGGTG CTGTTGCCGG
961GGCCTTGGCC CGGATGGCCG TGGGGCGGTA CCAGCTGTCT GCTCTCCTGG CAGGAATCGC
1021TGAGGGAGGG AAACGCGGCT CTGAATCAGC CCAGAACGAG CCTTCGGGAA GCTCACCCTC
1081CGATCTCGGT GTGCCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
1141ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
1201CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGATAA CTCGCTGGCC TCAAAGCATT
1261CACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)