Construct: ORF TRCN0000473323

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014551.1_s317c1
Derived from:
ccsbBroadEn_04505
DNA Barcode:
TAGAGGCGTACTTAGTCACGGCCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNH7 (90134)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473323
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 90134 KCNH7 potassium voltage-gated cha... NM_173162.3 100% 100%
2 human 90134 KCNH7 potassium voltage-gated cha... XM_017005221.2 86.4% 86.2% (many diffs)
3 human 90134 KCNH7 potassium voltage-gated cha... XM_017005220.2 60.7% 60.3% (many diffs)
4 human 90134 KCNH7 potassium voltage-gated cha... XM_017005219.2 60.4% 60% (many diffs)
5 human 90134 KCNH7 potassium voltage-gated cha... NM_033272.4 60.3% 59.9% (many diffs)
6 human 90134 KCNH7 potassium voltage-gated cha... XM_017005218.2 60% 59.6% (many diffs)
7 human 90134 KCNH7 potassium voltage-gated cha... XM_011512109.3 60% 59.5% (many diffs)
8 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_006498828.1 90.2% 96.9% (many diffs)
9 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_017315936.1 88.5% 95.2% (many diffs)
10 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_006498826.1 87.7% 93.7% (many diffs)
11 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_006498827.1 87.5% 94.2% (many diffs)
12 mouse 170738 Kcnh7 potassium voltage-gated cha... XR_001781102.1 74.2% (many diffs)
13 mouse 170738 Kcnh7 potassium voltage-gated cha... XR_374421.1 73.8% (many diffs)
14 mouse 170738 Kcnh7 potassium voltage-gated cha... XR_374422.2 73.3% (many diffs)
15 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_017315932.1 64.7% 69% (many diffs)
16 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_011239315.2 55.5% 59.2% (many diffs)
17 mouse 170738 Kcnh7 potassium voltage-gated cha... NM_133207.2 55.3% 59.1% (many diffs)
18 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_011239314.2 55.2% 58.8% (many diffs)
19 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_011239313.2 54.9% 58.7% (many diffs)
20 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_006498825.2 54.8% 58.8% (many diffs)
21 mouse 170738 Kcnh7 potassium voltage-gated cha... XR_374420.1 54% (many diffs)
22 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_017315931.1 43.9% 46.6% (many diffs)
23 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_011239316.2 28.5% 29.1% (many diffs)
24 mouse 170738 Kcnh7 potassium voltage-gated cha... XM_011239317.2 17.4% 17% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2262
ORF length:
2196
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc tgtgcgcagg gggcatgtgg caccacaaaa tacatttctg gggaccatca
121ttcggaaatt tgaagggcaa aataaaaaat ttatcattgc aaatgccaga gtgcagaact
181gtgccatcat ttattgcaac gatgggttct gtgagatgac tggtttctcc aggccagatg
241tcatgcaaaa gccatgcacc tgcgactttc tccatggacc cgagaccaag aggcatgata
301ttgcccaaat tgcccaggca ttgctggggt cagaagagag gaaagtggag gtcacctact
361atcacaaaaa tgggtccact tttatttgta acactcacat aattccagtg aaaaaccaag
421agggcgtggc tatgatgttc atcattaatt ttgaatatgt gacggataat gaaaacgctg
481ccaccccaga gagggtaaac ccaatattac caatcaaaac tgtaaaccgg aaattttttg
541ggttcaaatt ccctggtctg agagttctca cttacagaaa gcagtcctta ccacaagaag
601accccgatgt ggtggtcatc gattcatcta aacacagtga tgattcagta gccatgaagc
661attttaagtc tcctacaaaa gaaagctgca gcccctctga agcagatgac acaaaagctt
721tgatacagcc cagcaaatgt tctcccttgg tgaatatatc cggacctctt gaccattcct
781ctcccaaaag gcaatgggac cgactctacc ctgacatgct gcagtcaagt tcccagctgt
841cccattccag atcaagggaa agcttatgta gtatacggag agcatcttcg gtccatgata
901tagaaggatt cggcgtccac cccaagaaca tatttagaga ccgacatgcc agcgaagggc
961cttttaatca tatcaagtca agcctcctgg gatccacatc agattcaaac ctcaacaaat
1021acagcaccat taacaagatt ccacagctca ctctgaattt ttcagaggtc aaaactgaga
1081aaaagaattc atcacctcct tcttcagata aaaccattat tgcacccaag gttaaagatc
1141gaacacacaa tgtgactgag aaagtgaccc aggttctctc tttaggagca gatgtcctac
1201ctgaatacaa actgcagaca ccacgcatca acaagtttac gatattgcac tacagccctt
1261tcaaggcagt ctgggactgg cttatcctgc tgttggtcat atacactgct atatttactc
1321cctactctgc agccttcctc ctcaatgaca gagaagaaca gaaaagacga gaatgtggct
1381attcttgtag ccctttgaat gtggtagact tgattgtgga tattatgttt atcatagata
1441ttttaataaa cttcagaaca acatatgtaa atcagaatga agaagtggta agtgatcccg
1501ccaaaatagc aatacactac ttcaaaggct ggttcctgat tgacatggtt gcagcaattc
1561cttttgactt gctgattttt ggatcaggtt ctgatgagac aacaacatta attggtcttt
1621tgaagactgc ccgactcctc cgtcttgtgc gcgtggccag gaaactggat cgatattcag
1681aatatggcgc tgctgttcta atgctcttaa tgtgcatctt tgccctgatt gctcactggc
1741tggcttgcat ttggtatgcg attgggaatg tagaaaggcc ttacctgact gacaaaaTCG
1801GATGGTTGGA TTCCTTAGGA CAGCAAATTG GGAAACGTTA CAATGACAGT GACTCAAGTT
1861CTGGACCATC CATTAAAGAC AAATACGTCA CAGCACTTTA TTTTACCTTC AGCAGTTTAA
1921CCAGTGTAGG ATTCGGGAAT GTGTCTCCTA ACACGAATTC GGAGAAAATC TTTTCAATTT
1981GTGTCATGTT GATTGGCTCA CTAATGTATG CAAGCATTTT TGGGAATGTA TCTGCAATTA
2041TCCAAAGACT ATACTCGGGA ACTGCCAGGT ACCACATGCA GATGCTGCGA GTAAAAGAGT
2101TCATTCGCTT TCACCAAATC CCCAACCCTC TGAGGCAACG TCTTGAAGAA TATTTCCAGC
2161ACGCATGGAC TTACACCAAT GGCATTGACA TGAACATGGT ATGTATGTCT GTTTTCCAAA
2221ATGAAAGTGC CGCAGGCATT ATAGTGATAG CCAAAATGGA ATACCCAACT TTCTTGTACA
2281AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
2341AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
2401AGGACGATAG AGGCGTACTT AGTCACGGCC GACGCGTTAA GTCgacaatc aacctctgga
2461ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)

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