Construct: ORF TRCN0000474947

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015922.2_s317c1
Derived from:
ccsbBroadEn_14528
DNA Barcode:
CCGTTCGCCTTGATTCTTTCGACA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACVR1B (91)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474947
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 91 ACVR1B activin A receptor type 1B NM_004302.5 100% 100%
2 human 91 ACVR1B activin A receptor type 1B NM_020328.4 92.4% 92.3% 812_934del
3 human 91 ACVR1B activin A receptor type 1B NM_020327.3 89.7% 89.7% 0_1ins156
4 human 91 ACVR1B activin A receptor type 1B XM_017020201.2 75% 75.2% 1137_1139delGAGinsA;1141C>A;1143_1144ins374
5 human 91 ACVR1B activin A receptor type 1B XM_011538966.3 69.4% 69.4% (many diffs)
6 human 91 ACVR1B activin A receptor type 1B XM_011538967.3 59.1% 55.5% (many diffs)
7 mouse 11479 Acvr1b activin A receptor, type 1B NM_007395.3 90.8% 98.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1581
ORF length:
1515
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ggagtcggcc ggagcctcct ccttcttccc ccttgttgtc ctcctgctcg
121ccggcagcgg cgggtccggg ccccgggggg tccaggctct gctgtgtgcg tgcaccagct
181gcctccaggc caactacacg tgtgagacag atggggcctg catggtttcc attttcaatc
241tggatgggat ggagcaccat gtgcgcacct gcatccccaa agtggagctg gtccctgccg
301ggaagccctt ctactgcctg agctcggagg acctgcgcaa cacccactgc tgctacactg
361actactgcaa caggatcgac ttgagggtgc ccagtggtca cctcaaggag cctgagcacc
421cgtccatgtg gggcccggtg gagctggtag gcatcatcgc cggcccggtg ttcctcctgt
481tcctcatcat catcattgtt ttccttgtca ttaactatca tcagcgtgtc tatcacaacc
541gccagagact ggacatggaa gatccctcat gtgagatgtg tctctccaaa gacaagacgc
601tccaggatct tgtctacgat ctctccacct cagggtctgg ctcagggtta cccctctttg
661tccagcgcac agtggcccga accatcgttt tacaagagat tattggcaag ggtcggtttg
721gggaagtatg gcggggccgc tggaggggtg gtgatgtggc tgtgaaaata ttctcttctc
781gtgaagaacg gtcttggttc agggaagcag agatatacca gacggtcatg ctgcgccatg
841aaaacatcct tggatttatt gctgctgaca ataaagataa tggcacctgg acacagctgt
901ggcttgtttc tgactatcat gagcacgggt ccctgtttga ttatctgaac cggtacacag
961tgacaattga ggggatgatt aagctggcct tgtctgctgc tagtgggctg gcacacctgc
1021acatggagat cgtgggcacc caagggaagc ctggaattgc tcatcgagac ttaaagtcaa
1081agaacattct ggtgaagaaa aatggcatgt gtgccatagc agacctgggc ctggctgtcc
1141gtcatgatgc agtcactgac accattgaca ttgccccgaa tcagagggtg gggaccaaac
1201gatacatggc ccctGAAGTA CTTGATGAAA CCATTAATAT GAAACACTTT GACTCCTTTA
1261AATGTGCTGA TATTTATGCC CTCGGGCTTG TATATTGGGA GATTGCTCGA AGATGCAATT
1321CTGGAGGAGT CCATGAAGAA TATCAGCTGC CATATTACGA CTTAGTGCCC TCTGACCCTT
1381CCATTGAGGA AATGCGAAAG GTTGTATGTG ATCAGAAGCT GCGTCCCAAC ATCCCCAACT
1441GGTGGCAGAG TTATGAGGCA CTGCGGGTGA TGGGGAAGAT GATGCGAGAG TGTTGGTATG
1501CCAACGGCGC AGCCCGCCTG ACGGCCCTGC GCATCAAGAA GACCCTCTCC CAGCTCAGCG
1561TGCAGGAAGA CGTGAAGATC TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1621CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1681AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGACCGT TCGCCTTGAT
1741TCTTTCGACA ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)