Construct: ORF TRCN0000476251

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014015.1_s317c1
Derived from:
ccsbBroadEn_02673
DNA Barcode:
AAATTTCCCTTGACGTACATGCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FKBP9 (11328)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476251
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11328 FKBP9 FKBP prolyl isomerase 9 NM_007270.5 100% 100%
2 human 11328 FKBP9 FKBP prolyl isomerase 9 NM_001284341.1 91.4% 91.4% 220_378del
3 human 11328 FKBP9 FKBP prolyl isomerase 9 XM_011515115.3 61.8% 60.8% (many diffs)
4 human 11328 FKBP9 FKBP prolyl isomerase 9 NM_001284343.1 59.2% 58.9% 0_1ins694;5delC;6_7insGAT
5 human 360132 FKBP9P1 FKBP prolyl isomerase 9 pse... NR_003949.1 25.3% (many diffs)
6 human 360132 FKBP9P1 FKBP prolyl isomerase 9 pse... NR_027340.1 16.7% (many diffs)
7 mouse 27055 Fkbp9 FK506 binding protein 9 NM_012056.2 88% 92.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1779
ORF length:
1710
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgttccgg ggctggaggc ccccgccgcc accgctgctc ctgctgctgc
121tctgggtgac cgggcaggca gcgcccgtgg cgggcctggg ctccgacgcg gagctgcaga
181tcgagcggcg cttcgtgccc gacgagtgcc cgcgcaccgt gcgcagcggc gacttcgtgc
241gctaccacta cgtggggacg ttccccgacg gccagaagtt cgactccagc tatgacagag
301actccacttt caatgtgttt gtgggaaaag gacagctgat cacagggatg gaccaggctc
361ttgttgggat gtgcgtaaac gagagacgtt tcgtgaagat tcccccaaag cttgcctacg
421gaaatgaagg agtttctggt gtgatccccc ccaattcagt gcttcatttt gatgtacttc
481tgatggatat ttggaattct gaagaccagg ttcagattca cacctatttc aagcccccga
541gttgccctcg gaccatccag gtgtctgatt ttgtgaggta ccactacaac gggacgttcc
601tggacggaac tctgtttgat tcgagtcaca atcgcatgaa aacatatgac acgtatgtgg
661gaattggctg gctgattcct ggaatggata aagggctgct ggggatgtgt gtgggtgaga
721agcgcatcat caccattcct ccttttctgg cctatggaga ggatggagat gggaaagaca
781ttcccggtca ggcatctctg gtgtttgatg ttgcattatt ggacctccat aaccccaagg
841acagcatttc cattgagaac aaggtagtac ctgaaaactg tgagcggata agtcaaagtg
901gggactttct caggtatcat tacaatggca cgcttctgga tggcaccctc tttgattcca
961gctactctcg gaaccgcacg tttgacacgt acattgggca gggctacgtg attcctggga
1021tggatgaagg tctacttggt gtttgcattg gagaaaagcg aaggattgtg gtcccgcctc
1081acctggggta tggagaggaa ggaagaggga atatccccgg ctcggctgtg ctggtgtttg
1141acatccatgt gatcgacttc cacaaccctt cggactccat cagcatcacc tcccactaca
1201aaccccctga ctgctcagtg ctgagtaaga agggagatta cctcaaatat cactacaatg
1261cctcacttct ggatgggacc ctgctggact ccacgtggaa tttaggcaaa acttacaata
1321ttgttctggg atctgggcaa gttgtgttgg ggatggacat gggtctcaga gagatgtgcg
1381ttggcgagaa acggacagtg atcattccgc ctcacctggg ctatggggaa gctggcgtgg
1441atggagaagt gcccggcagt gccgtattag tgtttgacat tgagctgctg gagctggtgg
1501ctggccttcc tgaggggtac atgttcatat ggaatggtga ggtgtCACCC AACCTCTTTG
1561AAGAAATTGA CAAGGATGGC AACGGAGAAG TCCTCCTGGA AGAGTTCTCA GAGTACATTC
1621ACGCCCAGGT GGCATCTGGC AAAGGGAAAC TCGCTCCTGG CTTTGATGCT GAGCTGATTG
1681TGAAGAATAT GTTCACCAAC CAGGACCGGA ATGGAGATGG GAAGGTCACA GCCGAGGAAT
1741TTAAACTCAA AGACCAGGAA GCCAAACACG ATGAACTCTT GCCAACTTTC TTGTACAAAG
1801TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
1861GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1921ACGAAAATTT CCCTTGACGT ACATGCCTAC GCGTTAAGTC gacaatcaac ctctggatta
1981caaaatttgt gaaagatt

Download FASTA (ORF) (Full)

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