Construct: ORF TRCN0000476515

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014592.1_s317c1
Derived from:
ccsbBroadEn_10085
DNA Barcode:
CCCCGTCATCGCAAGACTCACATA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM189 (387521)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476515
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 387521 TMEM189 transmembrane protein 189 NM_199129.3 99.5% 98.8% (many diffs)
2 human 387521 TMEM189 transmembrane protein 189 NM_001162505.1 98.3% 97.7% (many diffs)
3 human 387522 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough NM_199203.2 66.9% 63.7% (many diffs)
4 human 387521 TMEM189 transmembrane protein 189 NR_027889.1 33.5% (many diffs)
5 mouse 407243 Tmem189 transmembrane protein 189 NM_145538.2 86.9% 91.8% (many diffs)
6 mouse 620966 Gm6194 predicted gene 6194; transm... NR_033512.1 40.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
879
ORF length:
810
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgggcgcn gaggactggc cgggccagca gctggagctg gacgaggacg
121aggcgtcttg ttgccgctgg ggcgcgcagc acgccggggc ccgcgagctg gctgcgctct
181actcgccagg caagcgcctc caggagtggt gctctgtgat cctgtgcttc agcctcatcg
241cccacaacct ggtccatctc ctgctgctgg cccgctggga ggacacaccc ctcgtcatac
301tcggtgttgt tgcaggggct ctcattgctg acttcttgtc tggcctggta cactggggtg
361ctgacacatg gggctctgtg gagctgccca ttgtggggaa ggctttcatc cgacccttcc
421gggagcacaa cattgaccca acagctatca cacggcacga cttcatcgag accaacgggg
481acaactgcct ggtgacactg ctgccgctgc taaacatggc ctacaagttc cgcacccaca
541gccctgaagc cctGGAGCAG CTATACCACT GGGAGTGCTT CGTCTTCTGC CTGATCATCT
601TCGGCACCTT CACCAACCAG ATCCACAAGT GGTCGCACAC GTACTTTGGG CTGCCACGCT
661GGGTCACCCT CCTGCAGGAC TGGCATGTCA TCCTGCCACG TAAACACCAT CGCATCCACC
721ACGTCTCACC CCACGAGACC TACTTCTGCA TCACCACAGG CTGGCTCAAC TACCCTCTGG
781AGAAGATAGG CTTCTGGCGA CGCCTGGAGG ACCTCATCCA GGGCCTGACG GGCGAGAAGC
841CTCGGGCAGA TGACATGAAA TGGGCCCAGA AGATCAAATT GCCAACTTTC TTGTACAAAG
901TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
961GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1021ACGACCCCGT CATCGCAAGA CTCACATAAC GCGTTAAGTC gacaatcaac ctctggatta
1081caaaatttgt gaaagatt

Download FASTA (ORF) (Full)