Construct: ORF TRCN0000478102

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017308.1_s317c1
Derived from:
ccsbBroadEn_00564
DNA Barcode:
CGGACTTCGCGTGCGTAGGTCTTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FGR (2268)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478102
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2268 FGR FGR proto-oncogene, Src fam... NM_001042729.2 100% 100%
2 human 2268 FGR FGR proto-oncogene, Src fam... NM_001042747.1 100% 100%
3 human 2268 FGR FGR proto-oncogene, Src fam... NM_005248.3 100% 100%
4 human 2268 FGR FGR proto-oncogene, Src fam... XM_006710452.2 100% 100%
5 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541010.1 100% 100%
6 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541011.2 86.9% 82.6% 226_227ins103;325_326ins104
7 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541012.2 77.5% 70.1% 1093_1094ins154;1230_1231ins203
8 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541013.3 66.5% 64.6% 1017_1018insGGCA;1056_1057ins527
9 human 2268 FGR FGR proto-oncogene, Src fam... XR_946583.3 65.6% 1_196del;1213_1214insGGCA;1780_2407del
10 human 2268 FGR FGR proto-oncogene, Src fam... XM_011541014.3 61.4% 61.4% 0_1ins612
11 human 2268 FGR FGR proto-oncogene, Src fam... XM_017000673.1 61.4% 61.4% 0_1ins612
12 human 2268 FGR FGR proto-oncogene, Src fam... XM_017000674.1 61.4% 61.4% 0_1ins612
13 mouse 14191 Fgr FGR proto-oncogene, Src fam... NM_010208.4 82.8% 84.1% (many diffs)
14 mouse 14191 Fgr FGR proto-oncogene, Src fam... XM_006538544.3 82.8% 84.1% (many diffs)
15 mouse 14191 Fgr FGR proto-oncogene, Src fam... XM_006538545.3 82.8% 84.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1653
ORF length:
1587
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg ctgtgtgttc tgcaagaaat tggagccggt ggccacggcc aaggaggatg
121ctggcctgga aggggacttc agaagctacg gggcagcaga ccactatggg cctgacccca
181ctaaggcccg gcctgcatcc tcatttgccc acatccccaa ctacagcaac ttctcctctc
241aggccatcaa ccctggcttc cttgatagtg gcaccatcag gggtgtgtca gggattgggg
301tgaccctgtt cattgccctg tatgactatg aggctcgaac tgaggatgac ctcaccttca
361ccaagggcga gaagttccac atcctgaaca atactgaagg tgactggtgg gaggctcggt
421ctctcagctc cggaaaaact ggctgcattc ccagcaacta cgtggcccct gttgactcaa
481tccaagctga agagtggtac tttggaaaga ttgggagaaa ggatgcagag aggcagctgc
541tttcaccagg caacccccag ggggcctttc tcattcggga aagcgagacc accaaaggtg
601cctactccct gtccatccgg gactgggatc agaccagagg cgatcatgtg aagcattaca
661agatccgcaa actggacatg ggcggctact acatcaccac acgggttcag ttcaactcgg
721tgcaggagct ggtgcagcac tacatggagg tgaatgacgg gctgtgcaac ctgctcatcg
781cgccctgcac catcatgaag ccgcagacgc tgggcctggc caaggacgcc tgggagatca
841gccgcagctc catcacgctg gagcgccggc tgggcaccgg ctgcttcggg gatgtgtggc
901tgggcacgtg gaacggcagc actaaggtgg cggtgaagac gctgaagccg ggcaccatgt
961ccccgaaggc cttcctggag gaggcgcagg tcatgaagct gctgcggcac gacaagctgg
1021tgcagctgta cgccgtggtg tcggaggagc ccatctacat cgtgaccgag ttcatgtgtc
1081acggcagctt gctggatttt ctcaagaacc cagagggcca ggatttgagg ctgccccaat
1141tggtggacat ggcagcccag gtagctgagg gcatggccta catggaacgc atgaactaca
1201ttcaccgcga cctgagggca gccaacatcc tggttgggga gcggctggcg tgcaagatcg
1261cagactttgg cttggcgcgt ctcatcaagg acgatgagta caacccctgc caaggttcCA
1321AGTTCCCCAT CAAGTGGACA GCCCCAGAAG CTGCCCTCTT TGGCAGATTC ACCATCAAGT
1381CAGACGTGTG GTCCTTTGGG ATCCTGCTCA CTGAGCTCAT CACCAAGGGC CGAATCCCCT
1441ACCCAGGCAT GAATAAACGG GAAGTGTTGG AACAGGTGGA GCAGGGCTAC CACATGCCGT
1501GCCCTCCAGG CTGCCCAGCA TCCCTGTACG AGGCCATGGA ACAGACCTGG CGTCTGGACC
1561CGGAGGAGAG GCCTACCTTC GAGTACCTGC AGTCCTTCCT GGAGGACTAC TTCACCTCCG
1621CTGAACCACA GTACCAGCCC GGGGATCAGA CATACCCAAC TTTCTTGTAC AAAGTGGTTG
1681ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1741GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGACG
1801GACTTCGCGT GCGTAGGTCT TCACGCGTTA AGTCgacaat caacctctgg attacaaaat
1861ttgtgaaaga tt

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