Construct: ORF TRCN0000478758

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004399.1_s317c1
Derived from:
ccsbBroadEn_03908
DNA Barcode:
TAGCGCCAACACCGTCGGCAAATT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
XPNPEP3 (63929)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478758
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 63929 XPNPEP3 X-prolyl aminopeptidase 3 NM_022098.4 100% 100%
2 mouse 321003 Xpnpep3 X-prolyl aminopeptidase 3, ... NM_001347075.1 87.1% 90.5% (many diffs)
3 mouse 321003 Xpnpep3 X-prolyl aminopeptidase 3, ... XM_006521087.2 73.6% 77.7% (many diffs)
4 mouse 321003 Xpnpep3 X-prolyl aminopeptidase 3, ... NM_177310.2 66.5% 63.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1587
ORF length:
1521
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61tttgcatgcc ttggctgctc tcagccccca agctggttcc cgctgtagca aacgtccgcg
121gcctctcagg atgtatgttg tgttcacagc gaaggtactc ccttcagcct gtcccagaaa
181ggaggattcc aaaccgatac ttaggccagc ccagcccctt tacacaccca cacctcctca
241gaccagggga ggtaactcca ggactatctc aggtggaata tgcacttcgc agacacaaac
301taatgtctct gatccagaag gaagctcaag ggcagagtgg gacagaccag acagtggttg
361tgctctccaa ccctacatac tacatgagca acgatattcc ctatactttc caccaagaca
421acaatttcct gtacctatgt ggattccaag agcctgatag cattcttgtc cttcagagcc
481tccctggcaa acaattacca tcacacaaag ccatactttt tgtgcctcgg cgagatccca
541gtcgagaact ttgggatggt ccgcgatctg gcactgatgg agcaatagct ctaactggag
601tagacgaagc ctatacgcta gaagaatttc aacatcttct accaaaaatg aaagctgaga
661cgaacatggt ttggtatgac tggatgaggc cctcacatgc acagcttcac tctgactata
721tgcagcccct gactgaggcc aaagccaaga gcaagaacaa ggttcggggt gttcagcagc
781tgatacagcg cctccggctg atcaagtctc ctgcagaaat tgaacgaatg cagattgctg
841ggaagctgac atcacaggct ttcatagaaa ccatgttcac cagtaaagcc cctgtggaag
901aagcctttct ttatgctaag tttgaatttg aatgccgggc tcgtggcgca gacattttag
961cctatccacc tgtggtggct ggtggtaatc ggtcaaacac tttgcactat gtgaaaaata
1021atcaactcat caaggatggg gaaatggtgc ttctggatgg aggttgtgag tcttcctgct
1081atgtgagtga catcacacgt acgtggccag tcaatggcag gttcaccgca cctcaggcag
1141aactctatga agccgttcta gagatccaaa gagattgttt ggccctctgc ttccctggga
1201caagcttgga gaacatctac agcatgatgc tgacccTGAT AGGACAGAAG CTTAAAGACT
1261TGGGGATCAT GAAGAACATT AAGGAAAATA ATGCCTTCAA GGCTGCTCGA AAATACTGTC
1321CTCATCATGT TGGCCACTAC CTCGGGATGG ATGTCCATGA CACTCCAGAC ATGCCCCGTT
1381CCCTCCCTCT GCAGCCTGGG ATGGTAATCA CAATTGAGCC CGGCATTTAT ATTCCAGAGG
1441ATGACAAAGA TGCCCCAGAG AAGTTTCGGG GTCTTGGTGT ACGAATTGAG GATGATGTAG
1501TGGTGACTCA GGACTCACCT CTCATCCTTT CTGCAGACTG TCCCAAAGAG ATGAATGACA
1561TTGAACAGAT ATGCAGCCAG GCTTCTTGCC CAACTTTCTT GTACAAAGTG GTTGATATCG
1621GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
1681AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GATAGCGCCA
1741ACACCGTCGG CAAATTACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1801aagatt

Download FASTA (ORF) (Full)