Construct: ORF TRCN0000478826

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008842.1_s317c1
Derived from:
ccsbBroadEn_03652
DNA Barcode:
TGGTCAGTCATACAACAGGCAGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EXOC2 (55770)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478826
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55770 EXOC2 exocyst complex component 2 NM_018303.6 100% 100%
2 human 55770 EXOC2 exocyst complex component 2 XM_017011018.1 100% 100%
3 human 55770 EXOC2 exocyst complex component 2 XM_017011019.1 100% 100%
4 human 55770 EXOC2 exocyst complex component 2 XM_017011020.1 100% 100%
5 human 55770 EXOC2 exocyst complex component 2 XM_017011021.1 100% 100%
6 human 55770 EXOC2 exocyst complex component 2 XM_017011022.1 100% 100%
7 human 55770 EXOC2 exocyst complex component 2 XM_017011023.1 100% 100%
8 human 55770 EXOC2 exocyst complex component 2 XM_017011024.1 100% 100%
9 human 55770 EXOC2 exocyst complex component 2 XM_017011025.1 89% 84.3% (many diffs)
10 human 55770 EXOC2 exocyst complex component 2 XM_017011026.1 80.6% 80.7% 2239A>G;2242_2248delTTAATCC;2250_2251ins529
11 human 55770 EXOC2 exocyst complex component 2 NR_073064.1 59.5% 1_328del;3101_4652del
12 mouse 66482 Exoc2 exocyst complex component 2 NM_025588.2 87.3% 93.6% (many diffs)
13 mouse 66482 Exoc2 exocyst complex component 2 XM_006516726.2 87.3% 93.6% (many diffs)
14 mouse 66482 Exoc2 exocyst complex component 2 XM_011244328.1 83% 88.7% (many diffs)
15 mouse 66482 Exoc2 exocyst complex component 2 XM_011244326.2 82.5% 88.3% (many diffs)
16 mouse 66482 Exoc2 exocyst complex component 2 XM_011244327.2 82.5% 88.3% (many diffs)
17 mouse 66482 Exoc2 exocyst complex component 2 XM_017315564.1 76.3% 80.8% (many diffs)
18 mouse 66482 Exoc2 exocyst complex component 2 XM_017315565.1 75.5% 81% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2838
ORF length:
2772
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc tcgatcacga caaccccccc ttgtgaccgg catctctcca aatgaaggga
121taccatggac gaaggtcaca atcaggggag aaaatctggg gactggcccc accgacctca
181taggcttgac catttgtgga cataattgcc tcctgacggc agaatggatg tctgcaagta
241aaatagtatg tcgagtggga caagccaaaa atgacaaagg agacattatt gtcaccacta
301agtcaggtgg cagaggaacc tcaacagtct ctttcaagct actcaaacct gagaaaatag
361gcattttgga tcagtctgct gtgtgggttg atgaaatgaa ttattatgat atgcgcactg
421acaggaacaa aggaattccg cccttgtcct tacgtcctgc taacccgctt ggcattgaga
481ttgaaaaaag taaattttcg cagaaggact tagaaatgct attccatgga atgagtgctg
541attttacaag tgagaatttc tcagcagcct ggtatcttat agagaatcac tcaaacacca
601gttttgagca gctcaaaatg gcagtcacca acctaaagag acaggctaac aagaagagtg
661agggcagcct ggcctatgtg aaaggcggtc tcagtacatt cttcgaagca caggatgccc
721tctcagccat ccatcaaaaa ctagaagcag atggaacgga aaaagtagaa ggatccatga
781cgcagaaact ggagaatgtt ctgaacagag caagtaatac tgcagacaca ttgtttcaag
841aagtattagg tcggaaagac aaggcagatt ccactagaaa tgcactcaat gtgcttcagc
901gatttaagtt tcttttcaac cttcctctaa atattgaaag gaatattcaa aagggtgatt
961atgatgtggt tattaatgat tatgaaaagg ccaagtcact ttttgggaaa acggaggtgc
1021aagttttcaa gaaatattat gctgaagtag aaacaaggat tgaagcttta agagaattac
1081ttctggataa attgcttgag acaccatcaa ctttacatga ccaaaaacgt tacataaggt
1141acctgtctga ccttcatgcg tctggtgacc ctgcttggca atgcattgga gcccaacaca
1201agtggatcct tcagctcatg cacagttgca aagagggcta cgtgaaagat ctgaaaggta
1261acccaggcct gcacagtccc atgttggatc ttgataatga tacacgtccc tcagtgttgg
1321gccatctcag tcagacagcg tccctgaaga ggggcagcag ctttcagtct ggtcgagacg
1381acacgtggag atacaaaact ccccacaggg tggcctttgt tgaaaaattg acaaaactcg
1441tcttgagcca gctgcctaac ttctggaaac tctggatctc ctacgttaat ggaagcctct
1501tcagtgagac tgctgagaag tcaggccaga ttgaaagatc aaagaatgta aggcaaagac
1561aaaatgattt taagaaaatg attcaggaag taatgcactc cctggtgaag cttacccgcg
1621gagccctgct tcccctcagc atccgggatg gggaagccaa gcagtacgga ggctgggagg
1681tgaagtgcga gctctccgga cagtggctcg ctcacgccat ccagactgta agacttactc
1741atgaatcgtt gactgccctt gaaattccta atgacctgtt acagactatc caggatctca
1801tcttggatct ccgagtacgt tgcgtaatgg ccacgttgca gcacacggcg gaagaaataa
1861agagattagc tgaaaaagaa gactggattg ttgacaatga aggactgact tctctaccat
1921gtcagtttga acagtgcatc gtgtgttctc tgcagtcact gaagggggtt ctggagtgca
1981agccgggaga ggccagtgtc ttccaacaac ctaaaacaca ggaggaggtt tgccagctaa
2041gcatcaatat aatgcaggtt tttatatact gtctggaaca gttgagcacc aagcctgatg
2101cagatataga tactacacat ctctctgttg atgtttcttc ccctgacttg tttggaagta
2161tccatgaaga cttcagcttg acctcagaac agcgcctttt gatagtccta agtaattgct
2221gctatctaga acgtcacacc ttcctaaata tcgcagaaca ttttgaaaag cacaacttcc
2281agggaataga aaaaatcaca caggttagca tggcctcatt gaaagaacta gatcaaagac
2341tctttgaaaa ttacatcgag ttgaaagcag atcccatcgt tggctcctta gaacctggaa
2401tttatgcagg atattttgat tGGAAGGACT GCCTGCCTCC AACAGGTGTC AGAAACTATT
2461TAAAAGAAGC ACTGGTGAAT ATAATTGCCG TGCATGCAGA GGTGTTCACC ATTTCCAAAG
2521AACTGGTCCC TCGGGTACTA TCCAAGGTGA TAGAAGCAGT TTCTGAAGAG CTCAGTCGAC
2581TGATGCAGTG TGTTTCATCC TTCAGCAAAA ATGGAGCTTT ACAGGCGAGA CTTGAAATCT
2641GTGCTTTGAG GGACACTGTG GCTGTTTACC TGACACCCGA AAGCAAGTCA AGTTTTAAGC
2701AGGCTTTGGA AGCCCTGCCC CAGCTTTCCA GTGGAGCAGA TAAAAAGTTA CTGGAAGAGC
2761TCCTGAACAA GTTCAAGAGT AGCATGCACT TGCAGCTCAC CTGTTTCCAA GCAGCTTCTT
2821CAACCATGAT GAAAACATAC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
2881TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
2941GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGATGGTCAG TCATACAACA
3001GGCAGACACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

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