Construct: ORF TRCN0000480991

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018989.2_s317c1
Derived from:
ccsbBroadEn_14633
DNA Barcode:
TGCACGGACTTGATTTCCTAAATA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ERBB4 (2066)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480991
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2066 ERBB4 erb-b2 receptor tyrosine ki... NM_005235.3 99.9% 100% 3923_3924delTG
2 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_006712364.3 98.8% 98.8% 1871_1915del;3968_3969delTG
3 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_005246376.3 98.8% 98.5% (many diffs)
4 human 2066 ERBB4 erb-b2 receptor tyrosine ki... NM_001042599.1 98.7% 98.7% 3135_3136ins48;3875_3876delTG
5 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_017003578.2 98% 98% 557_634del;4001_4002delTG
6 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_005246377.3 97.5% 97.3% (many diffs)
7 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_017003577.2 96.9% 96.9% 557_634del;1949_1993del;4046_4047delTG
8 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_017003580.2 96.8% 96.6% (many diffs)
9 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_017003581.2 96.8% 96.8% 557_634del;3213_3214ins48;3953_3954delTG
10 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_017003579.2 95.7% 95.7% (many diffs)
11 human 2066 ERBB4 erb-b2 receptor tyrosine ki... XM_017003582.1 83.1% 83.1% 1_1delAins622;1250_1294del;3347_3348delTG
12 mouse 13869 Erbb4 erb-b2 receptor tyrosine ki... XM_006495692.3 89.9% 97.3% (many diffs)
13 mouse 13869 Erbb4 erb-b2 receptor tyrosine ki... XM_006495693.3 88.8% 95.9% (many diffs)
14 mouse 13869 Erbb4 erb-b2 receptor tyrosine ki... NM_010154.2 88.7% 96.1% (many diffs)
15 mouse 13869 Erbb4 erb-b2 receptor tyrosine ki... XM_006495694.3 87.6% 94.7% (many diffs)
16 mouse 13869 Erbb4 erb-b2 receptor tyrosine ki... XM_006495695.3 57.5% 62.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3993
ORF length:
3924
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaagccggcg acaggacttt gggtctgggt gagccttctc gtggcggcgg
121ggaccgtcca gcccagcgat tctcagtcag tgtgtgcagg aacggagaat aaactgagct
181ctctctctga cctggaacag cagtaccgag ccttgcgcaa gtactatgaa aactgtgagg
241ttgtcatggg caacctggag ataaccagca ttgagcacaa ccgggacctc tccttcctgc
301ggtctgttcg agaagtcaca ggctacgtgt tagtggctct taatcagttt cgttacctgc
361ctctggagaa tttacgcatt attcgtggga caaaacttta tgaggatcga tatgccttgg
421caatattttt aaactacaga aaagatggaa actttggact tcaagaactt ggattaaaga
481acttgacaga aatcctaaat ggtggagtct atgtagacca gaacaaattc ctttgttatg
541cagacaccat tcattggcaa gatattgttc ggaacccatg gccttccaac ttgactcttg
601tgtcaacaaa tggtagttca ggatgtggac gttgccataa gtcctgtact ggccgttgct
661ggggacccac agaaaatcat tgccagactt tgacaaggac ggtgtgtgca gaacaatgtg
721acggcagatg ctacggacct tacgtcagtg actgctgcca tcgagaatgt gctggaggct
781gctcaggacc taaggacaca gactgctttg cctgcatgaa tttcaatgac agtggagcat
841gtgttactca gtgtccccaa acctttgtct acaatccaac cacctttcaa ctggagcaca
901atttcaatgc aaagtacaca tatggagcat tctgtgtcaa gaaatgtcca cataactttg
961tggtagattc cagttcttgt gtgcgtgcct gccctagttc caagatggaa gtagaagaaa
1021atgggattaa aatgtgtaaa ccttgcactg acatttgccc aaaagcttgt gatggcattg
1081gcacaggatc attgatgtca gctcagactg tggattccag taacattgac aaattcataa
1141actgtaccaa gatcaatggg aatttgatct ttctagtcac tggtattcat ggggaccctt
1201acaatgcaat tgaagccata gacccagaga aactgaacgt ctttcggaca gtcagagaga
1261taacaggttt cctgaacata cagtcatggc caccaaacat gactgacttc agtgtttttt
1321ctaacctggt gaccattggt ggaagagtac tctatagtgg cctgtccttg cttatcctca
1381agcaacaggg catcacctct ctacagttcc agtccctgaa ggaaatcagc gcaggaaaca
1441tctatattac tgacaacagc aacctgtgtt attatcatac cattaactgg acaacactct
1501tcagcacaat caaccagaga atagtaatcc gggacaacag aaaagctgaa aattgtactg
1561ctgaaggaat ggtgtgcaac catctgtgtt ccagtgatgg ctgttgggga cctgggccag
1621accaatgtct gtcgtgtcgc cgcttcagta gaggaaggat ctgcatagag tcttgtaacc
1681tctatgatgg tgaatttcgg gagtttgaga atggctccat ctgtgtggag tgtgaccccc
1741agtgtgagaa gatggaagat ggcctcctca catgccatgg accgggtcct gacaactgta
1801caaagtgctc tcattttaaa gatggcccaa actgtgtgga aaaatgtcca gatggcttac
1861agggggcaaa cagtttcatt ttcaagtatg ctgatccaga tcgggagtgc cacccatgcc
1921atccaaactg cacccaaggg tgtaacggtc ccactagtca tgactgcatt tactacccat
1981ggacgggcca ttccacttta ccacaacatg ctagaactcc cctgattgca gctggagtaa
2041ttggtgggct cttcattctg gtcattgtgg gtctgacatt tgctgtttat gttagaagga
2101agagcatcaa aaagaaaaga gccttgagaa gattcttgga aacagagttg gtggaaccat
2161taactcccag tggcacagca cccaatcaag ctcaacttcg tattttgaaa gaaactgagc
2221tgaagagggt aaaagtcctt ggctcaggtg cttttggaac ggtttataaa ggtatttggg
2281tacctgaagg agaaactgtg aagattcctg tggctattaa gattcttaat gagacaactg
2341gtcccaaggc aaatgtggag ttcatggatg aagctctgat catggcaagt atggatcatc
2401cacacctagt ccggttgctg ggtgtgtgtc tgagcccaac catccagctg gttactcaac
2461ttatgcccca tggctgcctg ttggagtatg tccacgagca caaggataac attggatcac
2521aactgctgct taactggtgt gtccagatag ctaagggaat gatgtacctg gaagaaagac
2581gactcgttca tcgggatttg gcagcccgta atgtcttagt gaaatctcca aaccatgtga
2641aaatcacaga ttttgggcta gccagactct tggaaggaga tgaaaaagag tacaatgctg
2701atggaggaaa gatgccaatt aaatggatgg ctctggagtg tatacattac aggaaattca
2761cccatcagag tgacgtttgg agctatggag ttactatatg ggaactgatg acctttggag
2821gaaaacccta tgatggaatt ccaacgcgag aaatccctga tttattagag aaaggagaac
2881gtttgcctca gcctcccatc tgcactattg acgtttacat ggtcatggtc aaatgttgga
2941tgattgatgc tgacagtaga cctaaattta aggaactggc tgctgagttt tcaaggatgg
3001ctcgagaccc tcaaagatac ctagttattc agggtgatga tcgtatgaag cttcccagtc
3061caaatgacag caagttcttt cagaatctct tggatgaaga ggatttggaa gatatgatgg
3121atgctgagga gtacttggtc cctcaggctt tcaacatccc acctcccatc tatacttcca
3181gagcaagaat tgactcgaat aggagtgaaa ttggacacag ccctcctcct gcctacaccc
3241ccatgtcagg aaaccagttt gtataccgag atggaggttt tgctgctgaa caaggagtgt
3301ctgtgcccta cagagcccca actagcacaa ttccagaagc tcctgtggca cagggtgcta
3361ctgctgagat ttttgatgac tcctgctgta atggcaccct acgcaagcca gtggcacccc
3421atgtccaaga ggacagtagc acccagaggt acagtgctga ccccaccgtg tttgccccag
3481aacggagccc acgaggagag ctggatgagg aaggttacat gactcctatg cgagacaaac
3541ccaaacaaga atacctgaat ccagtggagg agaacccttt tgtttctcgg agaaaaaatg
3601gagaccTTCA AGCATTGGAT AATCCCGAAT ATCACAATGC ATCCAATGGT CCACCCAAGG
3661CCGAGGATGA GTATGTGAAT GAGCCACTGT ACCTCAACAC CTTTGCCAAC ACCTTGGGAA
3721AAGCTGAGTA CCTGAAGAAC AACATACTGT CAATGCCAGA GAAGGCCAAG AAAGCGTTTG
3781ACAACCCTGA CTACTGGAAC CACAGCCTGC CACCTCGGAG CACCCTTCAG CACCCAGACT
3841ACCTGCAGGA GTACAGCACA AAATATTTTT ATAAACAGAA TGGGCGGATC CGGCCTATTG
3901TGGCAGAGAA TCCTGAATAC CTCTCTGAGT TCTCCCTGAA GCCAGGCACT GTGCTGCCGC
3961CTCCACCTTA CAGACACCGG AATACTGTGG TGCCAACTTT CTTGTACAAA GTGGTTGATA
4021TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
4081CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGATGCAC
4141GGACTTGATT TCCTAAATAA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
4201tgaaagatt

Download FASTA (ORF) (Full)