Construct: ORF TRCN0000488016

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021506.1_s317c1
DNA Barcode:
GCAACCCTCAGCCCTGAGCAATAA
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
DIP2A (23181)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488016
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23181 DIP2A disco interacting protein 2... NM_001353943.1 99.9% 100% 174A>G;2079G>A
2 human 23181 DIP2A disco interacting protein 2... NM_015151.4 99.9% 100% 174A>G;2079G>A
3 human 23181 DIP2A disco interacting protein 2... XM_017028295.2 99.9% 100% 174A>G;2079G>A
4 human 23181 DIP2A disco interacting protein 2... NM_001353942.1 99.8% 99.9% 174A>G;654_656delAGC;2082G>A
5 human 23181 DIP2A disco interacting protein 2... XM_017028294.2 99.8% 99.9% 174A>G;654_656delAGC;2082G>A
6 human 23181 DIP2A disco interacting protein 2... NM_001146116.1 99.7% 99.7% 174A>G;902_903insAGTTCAGCAACC;2067G>A
7 human 23181 DIP2A disco interacting protein 2... XM_017028293.1 97.7% 97.8% 174A>G;283_387del;2184G>A
8 human 23181 DIP2A disco interacting protein 2... XM_011529492.2 97.7% 97.7% (many diffs)
9 human 23181 DIP2A disco interacting protein 2... XM_017028291.1 97.7% 97.7% (many diffs)
10 human 23181 DIP2A disco interacting protein 2... XM_017028292.1 97.7% 97.7% (many diffs)
11 human 23181 DIP2A disco interacting protein 2... XM_017028298.2 97.2% 97.2% 174A>G;654_655ins129;1950G>A
12 human 23181 DIP2A disco interacting protein 2... XM_017028297.1 95.1% 95.1% (many diffs)
13 human 23181 DIP2A disco interacting protein 2... XM_017028302.2 94.6% 94.6% 174A>G;401_402ins252;1827G>A
14 human 23181 DIP2A disco interacting protein 2... XM_017028299.1 92.5% 92.5% (many diffs)
15 human 23181 DIP2A disco interacting protein 2... XM_017028301.1 88.9% 85.2% (many diffs)
16 human 23181 DIP2A disco interacting protein 2... XM_017028303.1 88.3% 85.1% (many diffs)
17 human 23181 DIP2A disco interacting protein 2... XM_017028300.1 87.6% 84.3% (many diffs)
18 human 23181 DIP2A disco interacting protein 2... XM_017028304.1 83.6% 83.6% (many diffs)
19 human 23181 DIP2A disco interacting protein 2... XM_011529501.1 72.6% 72.5% (many diffs)
20 human 23181 DIP2A disco interacting protein 2... NM_206889.3 56.4% 56.2% (many diffs)
21 human 23181 DIP2A disco interacting protein 2... NM_206890.3 53.4% 53.5% 174A>G;2079G>A;2523_2524ins2190
22 human 23181 DIP2A disco interacting protein 2... XM_011529502.1 52.5% 52.2% (many diffs)
23 human 23181 DIP2A disco interacting protein 2... XM_017028305.1 52.5% 52.2% (many diffs)
24 human 23181 DIP2A disco interacting protein 2... NM_206891.3 51.3% 50.9% (many diffs)
25 human 23181 DIP2A disco interacting protein 2... NM_001146115.2 50.7% 50.7% (many diffs)
26 human 23181 DIP2A disco interacting protein 2... NM_001353944.2 48.1% 48.1% (many diffs)
27 mouse 64451 Dip2a disco interacting protein 2... NM_001081419.2 86.7% 93.2% (many diffs)
28 mouse 64451 Dip2a disco interacting protein 2... XM_006513939.3 86.1% 92.6% (many diffs)
29 mouse 64451 Dip2a disco interacting protein 2... XM_006513940.3 84.2% 90.8% (many diffs)
30 mouse 64451 Dip2a disco interacting protein 2... XM_006513941.3 81.7% 88.3% (many diffs)
31 mouse 64451 Dip2a disco interacting protein 2... XR_001779571.1 45.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
4782
ORF length:
4713
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat ggctgaccgc gggtgcccgc tggaggcggc gccgctgcct gccgaggtgc
121gggagagcct ggctgagctg gagctggagc tgtcggaagg tgacatcact caaaaaggat
181atgaaaagaa aagggcaaag ctgcttgcac gttatatacc gcttattcaa ggaatagacc
241cgtctctgca agcagagaat agaattcctg ggccctcaca aaccacggcc gctgcaccca
301agcagcagaa gtctcggccc accgcctcga gggatgagcg cttccggtca gatgtccaca
361ctgaagccgt gcaagcagct ttggccaaat acaaagagag gaagatgcct atgccttcga
421agagacgttc tgtccttgtg cattcgtctg tggaaaccta cacccctcca gacacgtcgt
481ctgcctcaga agatgagggc tctttacggc gacccgggcg actcacctcc actccgctcc
541agagccattc cagcgtcgag ccctggctcg accgggtcat tcagggctcg tccacctcat
601cctctgcatc ctccacctca tctcacccgg gagggagacc caccactgct cccagtgctg
661cagccacgcc gggggccgcc gctaccactg cactcgcagg cctcgaggcc cacacccaca
721tagatctgca ttctgcccct cctgatgtca ccacgggcct cgtggagcat tcgtactttg
781agcgtccaca ggtggcttct gtgagaagtg ttcctcgggg gtgcagcggg agcatgctgg
841aaacagcaga tggtgtccct gtgaacagca gagtgtcctc caaaatccag cagcttctga
901acaccctgaa gaggccaaag cgccctccac tgaaggagtt ctttgtggat gattttgagg
961aattgttgga agttcagcaa ccagatccaa atcagccaaa gcctgaggga agcgagacga
1021gtgtgctgag aggggagcct ctcactgcag gtgtcccccg accgccgtcg ctgttggcca
1081ccttgcagcg ctggggcaca acacagccca aatccccctg tctgactgcc ttggatacaa
1141ctgggaaagc cgtctacact ctcacctatg gtaaactttg gagtcggagt ttaaaactag
1201cttatactct acttaataaa ctgacaagta agaatgaacc tctacttaaa cctggagaca
1261gagtggcgct cgtgtttccg aatagtgacc ctgtgatgtt catggttgca ttttatgggt
1321gtctcctggc agagctggtt cctgtcccca tagaagtgcc attaacaaga aaggatgcag
1381gcagccagca ggttgggttt ctgctgggca gctgtggagt cttcttggcc ctgaccacag
1441acgcttgtca gaaaggcctc cccaaggcac agacaggaga ggtggcagct ttcaaaggtt
1501ggcccccgct ctcctggcta gtgattgatg ggaagcatct agccaagccc ccaaaggact
1561ggcaccctct ggcccaggac acagggactg ggactgccta cattgagtat aaaaccagca
1621aagaaggcag tacggtgggg gtcacagtgt cccacgcatc cctgctggca cagtgccggg
1681ctctgaccca ggcgtgcggg tactcagaag ctgaaacatt aacaaacgtg ctggatttca
1741aaagggatgc tggtctgtgg catggcgtgt taacaagcgt catgaacagg atgcacgtgg
1801tcagcgtccc ctacgcgctg atgaaggcga acccactctc ctggatccag aaagtgtgct
1861tctataaagc tcgggccgcg ctggtgaagt cgcgagacat gcactggtct ctcctagctc
1921agcggggcca gagggacgtc agcctcagct cactgcgcat gctgattgtg gccgatggtg
1981ccaacccgtg gtcgatctcc tcctgtgacg ccttcctcaa cgtcttccag tccagaggtc
2041tgaggccaga ggtcatctgt ccttgtgcaa gttctcctga ggcgctgact gtcgccatcc
2101gcaggccacc tgatctggga ggaccacctc caagaaaagc agtcctatcg atgaacggtc
2161taagttatgg tgttatcaga gtggatactg aagaaaagtt gtcagtcctt actgttcagg
2221acgttggtca ggtgatgcct ggagctaatg tatgtgttgt gaagttagaa ggtacccctt
2281atctttgtaa aactgatgaa gtgggagaaa tatgcgtcag ttccagtgca actggcacag
2341cgtactatgg attgcttgga atcacgaaga atgtgtttga ggcagttccg gtcaccacag
2401gaggagcacc catctttgac aggccattca ccaggacagg cctgctgggc ttcatcgggc
2461ctgacaacct ggtcttcatc gtgggcaaac tggacgggct gatggtcact ggagttcgca
2521gacacaatgc agatgacgtt gtggccaccg cactggccgt ggagcccatg aagtttgtct
2581acagaggcag gatcgctgtg ttctctgtga ccgtgctgca cgacgaccgg attgtcctgg
2641tggctgagca gcggccggat gcctcggagg aggacagctt ccagtggatg agccgtgtgc
2701tgcaggccat tgatagcatc caccaggtgg gcgtgtactg tctggccctg gttcctgcca
2761acaccttgcc caaggctcct ctcggaggga ttcacatttc tgaaaccaaa cagcgctttc
2821tggaagggac gctgcacccg tgtaatgtgc tgatgtgccc tcacacctgt gttaccaacc
2881tccccaaacc tcgtcagaaa caaccagagg ttggaccagc ctcaatgatc gtggggaacc
2941tggttgctgg gaagagaatc gctcaggctt ccgggagaga gctcgcccac ctggaggaca
3001gcgaccaggc acggaagttc ctgttcctgg ctgacgtgct gcagtggcgt gcccacacca
3061ctcctgacca cccgctgttc ttgctgctga acgccaaggg caccgtcaca agcactgcaa
3121cctgtgtcca gctgcacaaa agggctgaga gagtggccgc ggctctgatg gagaagggaa
3181gactgagtgt tggggaccat gtggctctgg tctacccacc aggggtggac ctcattgccg
3241cgttctatgg ctgcttgtac tgtggctgcg tgcctgtcac cgtgcggccc ccgcaccctc
3301agaacctcgg caccacactg cccaccgtca agatgatcgt ggaggtcagc aagtctgcat
3361gcgtcctcac cacgcaggct gtcacacggc tgctcaggtc caaggaggct gctgctgccg
3421tggacatcag gacctggccc accatcctag acacagatga catcccaaaa aagaagatag
3481caagcgtttt caggcccccc tcccccgatg tcctcgcata cttggacttc agcgtgtcaa
3541ccactgggat attagcggga gtgaagatgt cgcacgcggc cacaagcgcc ttatgccgct
3601ccataaagct gcagtgtgag ctgtacccct cgcggcagat cgccatctgc ctcgacccct
3661actgtggcct tggttttgcc ctgtggtgtc tgtgcagtgt ctactcggga caccaatcag
3721tgctggtgcc cccgctggag ctggagagca acgtgtccct gtggctgtcg gccgtcagcc
3781agtacaaggc ccgcgtcacc ttctgctcct actctgtgat ggagatgtgc accaagggcc
3841taggcgcaca gacgggtgtc ctcaggatga agggggtgaa cctgtcatgt gtgcgcacgt
3901gcatggtggt cgccgaggag cggcccagga ttgcgctgac ccagtccttc tccaagctct
3961tcaaggacct gggcctgccg gcccgcgccg taagcaccac gttcgggtgc agggtcaacg
4021tggccatctg cctccagggc acagctggcc cggaccccac aaccgtctac gtggacatgc
4081gggcactgcg ccatgacagg gttcgtttgg tagaacgggg ttctccgcac agcctgccat
4141tgatggagtc tggaaagatc ctccccggcg tgaaggtcat catcgcacac accgagacca
4201aaggaccctt gggagactca cacctgggag agatctgggt aagcagcccc cacaatgcca
4261ccgggtacta caccgtttac ggggaggagg cgcttcatgc cgaccacttc agtgcccggc
4321tgagttttgg agacacacag accatctggg caaggaccgg ctaccttggc ttccttcggc
4381gaacagagct cactgatgcc agtggagggc ggcacgatgc actgtatgtg gttgggtctc
4441tggatgaaac tctggagctc agaggcatgc ggtaccaccc catcgacatt gagaccTCTG
4501TCATCCGAGC ACACAGGAGC ATCGCTGAGT GTGCCGTATT CACCTGGACC AACCTGCTGG
4561TGGTGGTGGT GGAGCTGGAT GGGCTAGAGC AGGATGCCCT GGACCTGGTG GCCCTGGTGA
4621CCAACGTGGT GCTGGAGGAG CACTACCTGG TCGTGGGAGT GGTGGTCATC GTGGACCCAG
4681GGGTGATCCC TATCAACTCT CGGGGTGAGA AGCAGCGCAT GCACCTGCGG GACGGCTTCC
4741TGGCTGACCA GCTGGACCCC ATCTATGTCG CCTACAACAT GTGAAAGCTT GACCCAGCTT
4801TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
4861CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
4921CTTGTGGAAA GGACGAGCAA CCCTCAGCCC TGAGCAATAA ACGCGTTAAG TCgacaatca
4981acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)