Construct: ORF TRCN0000489559

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020072.1_s317c1
DNA Barcode:
ACATCAGTGTCGACACGCCAGATT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BTN3A3 (10384)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489559
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_006994.5 99.9% 99.8% 1752_1753insG
2 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_197974.3 91.5% 91.4% 0_1ins126;790_791ins21;1605_1606insG
3 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_007048.6 79.2% 74.7% (many diffs)
4 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_005248833.2 78.4% 73.8% (many diffs)
5 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_001145008.2 70.9% 67% (many diffs)
6 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_006714983.3 64.1% 60.3% (many diffs)
7 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_001242803.2 64% 63.7% 0_1ins126;307_308ins504;1122_1123insG
8 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_001145009.2 57.6% 49.7% (many diffs)
9 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197246.2 54.3% 51.9% (many diffs)
10 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197247.3 54.3% 51.9% (many diffs)
11 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_007047.5 54.3% 51.9% (many diffs)
12 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248827.4 54.3% 51.9% (many diffs)
13 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010211.1 54.3% 51.9% (many diffs)
14 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010212.1 54.3% 51.9% (many diffs)
15 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_194441.3 54.2% 49% (many diffs)
16 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_005248834.4 54.2% 49% (many diffs)
17 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714979.4 53.8% 51.5% (many diffs)
18 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714980.4 53.8% 51.5% (many diffs)
19 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714981.4 53.8% 51.5% (many diffs)
20 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514267.3 53.8% 51.5% (many diffs)
21 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197248.2 49.2% 47.3% (many diffs)
22 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197249.2 47.2% 44.9% (many diffs)
23 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010214.2 47.2% 44.9% (many diffs)
24 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714982.4 46.8% 44.5% (many diffs)
25 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514269.3 46.8% 44.5% (many diffs)
26 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010213.2 46.8% 44.5% (many diffs)
27 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248831.4 43.7% 41.8% (many diffs)
28 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248832.4 43.7% 41.8% (many diffs)
29 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_926039.3 42.6% (many diffs)
30 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514270.3 39.1% 37.2% (many diffs)
31 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514271.2 39.1% 37.2% (many diffs)
32 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010215.2 39.1% 37.2% (many diffs)
33 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010216.2 36.6% 34.8% (many diffs)
34 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010217.2 32% 30.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1824
ORF length:
1755
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat gaaaatggca agttccctgg ctttccttct gctcaacttt catgtctccc
121tcttcttggt ccagctgctc actccttgct cagctcagtt ttctgtgctt ggaccctctg
181ggcccatcct ggccatggtg ggtgaagacg ctgatctgcc ctgtcacctg ttcccgacca
241tgagtgcaga gaccatggag ctgaggtggg tgagttccag cctaaggcag gtggtgaacg
301tgtatgcaga tggaaaggaa gtggaagaca ggcagagtgc accgtatcga gggagaactt
361cgattctgcg ggatggcatc actgcaggga aggctgctct ccgaatacac aacgtcacag
421cctctgacag tggaaagtac ttgtgttatt tccaagatgg tgacttctac gaaaaagccc
481tggtggagct gaaggttgca gcattgggtt ctgatcttca cattgaagtg aagggttatg
541aggatggagg gatccatctg gagtgcaggt ccactggctg gtacccccaa ccccaaataa
601agtggagcga caccaaggga gagaacatcc cggctgtgga agcacctgtg gttgcagatg
661gagtgggcct gtatgcagta gcagcatctg tgatcatgag aggcagctct ggtgggggtg
721tatcctgcat catcagaaat tccctcctcg gcctggaaaa gacagccagc atatccatcg
781cagacccctt cttcaggagc gcccagccct ggatcgcggc cctggcaggg accctgccta
841tctcgttgct gcttctcgca ggagccagtt acttcttgtg gagacaacag aaggaaaaaa
901ttgctctgtc cagggagaca gaaagagagc gagagatgaa agaaatggga tacgctgcaa
961cagagcaaga aataagccta agagagaagc tccaggagga actcaagtgg aggaaaatcc
1021agtacatggc tcgtggagag aagtctttgg cctatcatga atggaaaatg gccctcttca
1081aacctgcgga tgtgattctg gatccagaca cggcaaacgc catcctcctt gtttctgagg
1141accagaggag tgtgcagcgt gctgaagagc cgcgggatct gccagacaac cctgagagat
1201ttgaatggcg ttactgtgtc cttggctgtg aaaacttcac atcagggaga cattactggg
1261aggtggaagt gggggacaga aaagagtggc atattggggt atgtagtaag aacgtggaga
1321ggaaaaaagg ttgggtcaaa atgacaccgg agaacggata ctggactatg ggcctgactg
1381atgggaataa gtatcgggct ctcactgagc ccagaaccaa cctgaaactt cctgagcctc
1441cTAGGAAAGT GGGGATCTTC CTGGACTATG AGACTGGAGA GATCTCGTTC TATAATGCCA
1501CAGATGGATC TCATATCTAC ACCTTTCCGC ACGCCTCTTT CTCTGAGCCT CTATATCCTG
1561TTTTCAGAAT TTTGACCTTG GAGCCCACTG CCCTGACCAT TTGCCCAATA CCAAAAGAAG
1621TAGAGAGTTC CCCCGATCCT GACCTAGTGC CTGATCATTC CCTGGAGACA CCACTGACCC
1681CGGGCTTAGC TAATGAAAGT GGGGAGCCTC AGGCTGAAGT AACATCTCTG CTTCTCCCTG
1741CCCACCCTGG AGCTGAGGTC TCCCCTTCTG CAACAACCAA TCAGAACCAT AAGCTACAGG
1801CACGCACTGA AGCACTTTAC GACCCAGCTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1861CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1921AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAACAT CAGTGTCGAC
1981ACGCCAGATT ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)