Construct: ORF TRCN0000491407

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017745.1_s317c1
Derived from:
ccsbBroadEn_01428
DNA Barcode:
ATACTTCTGGCTACTGGTCGTCCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RPL26 (6154)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491407
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6154 RPL26 ribosomal protein L26 NM_000987.5 100% 100%
2 human 6154 RPL26 ribosomal protein L26 NM_001315530.2 100% 100%
3 human 6154 RPL26 ribosomal protein L26 NM_001315531.2 100% 100%
4 human 51121 RPL26L1 ribosomal protein L26 like 1 NM_001317980.1 84.1% 98.6% (many diffs)
5 human 51121 RPL26L1 ribosomal protein L26 like 1 NM_001317981.1 84.1% 98.6% (many diffs)
6 human 51121 RPL26L1 ribosomal protein L26 like 1 NM_001317982.1 84.1% 98.6% (many diffs)
7 human 51121 RPL26L1 ribosomal protein L26 like 1 NM_016093.3 84.1% 98.6% (many diffs)
8 human 51121 RPL26L1 ribosomal protein L26 like 1 XM_011534565.2 84.1% 98.6% (many diffs)
9 human 51121 RPL26L1 ribosomal protein L26 like 1 XM_017009519.2 84.1% 98.6% (many diffs)
10 human 51121 RPL26L1 ribosomal protein L26 like 1 XM_017009520.1 84.1% 98.6% (many diffs)
11 mouse 19941 Rpl26 ribosomal protein L26 NM_009080.2 87.8% 100% (many diffs)
12 mouse 100034726 Gm15772 predicted gene 15772; ribos... NR_003373.1 71.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
504
ORF length:
435
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaagtttaat ccctttgtga cttccgaccg aagcaagaat cgcaaaaggc
121atttcaatgc accttcccac attcgaagga agattatgTC TTCCCCTCTT TCCAAAGAGC
181TGAGACAGAA GTACAACGTG CGATCCATGC CCATCCGAAA GGATGATGAA GTTCAGGTTG
241TACGTGGACA CTATAAAGGT CAGCAAATTG GCAAAGTAGT CCAGGTTTAC AGGAAGAAAT
301ATGTTATCTA CATTGAACGG GTGCAGCGGG AAAAGGCTAA TGGCACAACT GTCCACGTAG
361GCATTCACCC CAGCAAGGTG GTTATCACTA GGCTAAAACT GGACAAAGAC CGCAAAAAGA
421TCCTCGAACG GAAAGCCAAA TCTCGCCAAG TAGGAAAGGA AAAGGGCAAA TACAAGGAAG
481AAACCATTGA GAAGATGCAG GAATTGCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
541AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
601TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAA TACTTCTGGC
661TACTGGTCGT CCAACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
721att

Download FASTA (ORF) (Full)