Construct: ORF TRCN0000491631

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000031.1_s317c1
Derived from:
ccsbBroadEn_02938
DNA Barcode:
AGATCAACGCGCCCATACGCACAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR2L2 (26246)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491631
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26246 OR2L2 olfactory receptor family 2... NM_001004686.2 100% 100%
2 human 26246 OR2L2 olfactory receptor family 2... XM_011544158.2 100% 100%
3 human 81466 OR2L5 olfactory receptor family 2... NM_001258284.1 93.8% 90% (many diffs)
4 human 26247 OR2L1P olfactory receptor family 2... NR_002145.1 91.7% (many diffs)
5 human 391190 OR2L8 olfactory receptor family 2... NM_001001963.1 89.1% 85.5% (many diffs)
6 human 391192 OR2L3 olfactory receptor family 2... NM_001004687.1 88.8% 84.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1005
ORF length:
936
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggaaaattac aatcaaacat caactgattt catcttattg gggctgttcc
121cacaatcaag aattggcctt ttcgtattca ccctcatttt tctcattttc ctaatggctc
181taattggaaa tctatccatg attcttctca tctttttgga catccatctc cacacaccta
241tgtatttcct acttagtcag ctctccctca ttgacctaaa ttacatctcc accattgttc
301caaagatggt ttatgatttt ctgtatggaa acaagtctat ctccttcact ggatgtggga
361ttcagagttt cttcttcttg actttagcag ttgcagaagg gctgctcctg acatcaatgg
421cctatgatcg ttatgtggcc atttgctttc ctctccacta tcccatccgt ataagcaaaa
481gagtgtgtgt gatgatgata acaggatctt ggatgataag ctctatcaac tcttgtgctc
541acacagtata tgcactctgt atcccatatt gcaagtccag agccatcaat cattttttct
601gtgatgttcc agctatgttg acgctagcct gcacagacac ttgggtctat gagagcacag
661tgtttttgag cagcaccatc tttcttgtgc ttcctttcac tggtattgca tgttcctatg
721gccgggttct ccttgctgtc taccgcatgc actctgcaga agggaggaag aaggcctatt
781caacctgtag cacccacctc actgtagtgt ccttctacta tgcaCCCTTT GCTTATACCT
841ATGTACGTCC AAGATCCCTG CGATCTCCAA CAGAGGACAA GATTCTGGCT GTTTTCTACA
901CCATCCTCAC CCCAATGCTC AACCCCATCA TCTACAGCCT GAGAAACAAG GAGGTGATGG
961GGGCCCTGAC ACAAGTGATT CAGAAAATCT TCTCAGTGAA AATGTTGCCA ACTTTCTTGT
1021ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
1081AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
1141GAAAGGACGA AGATCAACGC GCCCATACGC ACATACGCGT TAAGTCgaca atcaacctct
1201ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)