Construct: ORF TRCN0000491841

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019960.2_s317c1
DNA Barcode:
CCGTAGACTGTAACGTTAATAGGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NR2C2 (7182)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491841
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7182 NR2C2 nuclear receptor subfamily ... NM_003298.5 99.8% 100% 1844_1845delTA
2 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534064.3 99.8% 100% 1844_1845delTA
3 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534065.3 99.8% 100% 1844_1845delTA
4 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534066.3 99.8% 100% 1844_1845delTA
5 human 7182 NR2C2 nuclear receptor subfamily ... NM_001291694.2 96.8% 96.9% 70_71ins57;1787_1788delTA
6 human 7182 NR2C2 nuclear receptor subfamily ... XM_017007120.1 96.8% 96.9% 70_71ins57;1787_1788delTA
7 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534058.3 94.8% 94.9% 1_99del;1943_1944delTA
8 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534059.2 94.8% 94.9% 1_99del;1943_1944delTA
9 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534061.3 94.8% 94.9% 1_99del;1943_1944delTA
10 human 7182 NR2C2 nuclear receptor subfamily ... XM_017007118.2 94.8% 94.9% 1_99del;1943_1944delTA
11 human 7182 NR2C2 nuclear receptor subfamily ... XM_017007119.1 94.8% 94.9% 1_99del;1943_1944delTA
12 human 7182 NR2C2 nuclear receptor subfamily ... XM_011534063.3 91.8% 91.9% 1_99del;169_170ins57;1886_1887delTA
13 human 7182 NR2C2 nuclear receptor subfamily ... XM_024453739.1 67.6% 67.8% 0_1ins594;1250_1251delTA
14 mouse 22026 Nr2c2 nuclear receptor subfamily ... NM_011630.3 89.5% 95.2% (many diffs)
15 mouse 22026 Nr2c2 nuclear receptor subfamily ... XM_006505904.3 89.5% 95.2% (many diffs)
16 mouse 22026 Nr2c2 nuclear receptor subfamily ... XM_006505905.3 89.5% 95.2% (many diffs)
17 mouse 22026 Nr2c2 nuclear receptor subfamily ... XM_006505906.3 89.5% 95.2% (many diffs)
18 mouse 22026 Nr2c2 nuclear receptor subfamily ... NM_001347342.1 85% 90.4% (many diffs)
19 mouse 22026 Nr2c2 nuclear receptor subfamily ... XM_006505902.2 85% 90.4% (many diffs)
20 mouse 22026 Nr2c2 nuclear receptor subfamily ... XM_017321517.1 62.7% 66.6% (many diffs)
21 mouse 22026 Nr2c2 nuclear receptor subfamily ... XM_017321518.1 62.7% 66.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
1917
ORF length:
1845
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgaccagc ccctccccac gcatccagat aatctccacc gactctgctg
121tagcctcacc tcagcgcatt cagggctctg aacctgcctc tggcccattg agtgttttca
181catctttgaa caaagagaag attgtcacag accagcagac aggacagaaa atccagatag
241tcaccgcagt ggacgcctcc ggatccccca aacagcagtt catcctgacc agcccagatg
301gagctggaac tgggaaggtg atcctggctt ccccagagac atccagcgcc aagcaactca
361tattcaccac ctcagacaac ctcgtccctg gcaggatcca gattgtcacg gattctgcct
421ctgtggagcg tttactgggg aagacggacg tccagcggcc ccaggtggta gagtactgtg
481tggtctgtgg cgacaaagcc tccggccgtc actatggggc tgtcagttgt gaaggttgca
541aaggtttctt caaaaggagt gtgaggaaaa atttgaccta cagctgccgg agcaaccaag
601actgcatcat caataaacat caccggaacc gctgtcagtt ttgccggctg aaaaaatgct
661tagagatggg catgaaaatg gaatctgtgc agagtgaacg gaagcccttc gatgtgcaac
721gggagaaacc aagcaattgt gctgcttcaa ctgagaaaat ctatatccgg aaagacctga
781gaagtcccct gatagctact cccacgtttg tggcagacaa agatggagca agacaaacag
841gtcttcttga tccagggatg cttgtgaaca tccagcagcc tttgatacgt gaggatggta
901cagttctcct ggccacggat tctaaggctg aaacaagcca gggagctctg ggcacactgg
961caaatgtagt gacctccctt gccaacctaa gtgaatcttt gaacaacggt gacacttcag
1021aaatccagcc agaggaccag tctgcaagtg agataactcg ggcatttgat accttagcta
1081aagcacttaa taccacagac agctcctctt ctccaagctt ggcagatggg atagacacca
1141gtggaggagg gagcatccac gtcatcagca gagaccagtc gacacccatc attgaggttg
1201aaggccccct cctttcagac acacacgtca catttaagct aacaatgccc agtccaatgc
1261cagagtacct caacgtgcac tacatctgtg agtctgcatc ccgtctgctt ttcctctcaa
1321tgcactgggc tcggtcaatc ccagcctttc aggcacttgg gcaggactgc aacaccagcc
1381ttgtgcgggc ctgctggaat gagctcttca ccctcggcct ggcccagtgt gcccaggtca
1441tgagtctctc caccatcctg gctgccattg tcaaccacct gcagaacagc atccaggaag
1501ataaactttc tggtgaccgg ataaagcaag tcatgGAGCA CATCTGGAAG CTGCAGGAGT
1561TCTGTAACAG CATGGCGAAG CTGGATATAG ATGGCTATGA GTATGCATAC CTTAAAGCTA
1621TAGTTCTCTT TAGCCCCGAT CATCCAGGTT TGACCAGCAC AAGCCAGATT GAAAAATTCC
1681AAGAAAAGGC ACAGATGGAG TTGCAGGACT ATGTTCAGAA AACCTACTCA GAAGACACCT
1741ACCGATTGGC CCGGATCCTC GTTCGCCTGC CGGCACTCAG GCTGATGAGC TCCAACATAA
1801CAGAAGAACT TTTTTTTACT GGTCTCATTG GCAATGTTTC GATAGACAGC ATAATCCCCT
1861ACATCCTCAA GATGGAGACA GCAGAGTATA ATGGCCAGAT CACCGGAGCC AGTCTAGACC
1921CAGCTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1981TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
2041ATATATCTTG TGGAAAGGAC GACCGTAGAC TGTAACGTTA ATAGGGACGC GTTAAGTCga
2101caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)