Construct: ORF TRCN0000492194
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF020139.2_s317c1
- DNA Barcode:
- ATCCTCCCCCCGGAGATAATCTAT
- Epitope Tag:
- V5 (not translated due to prior stop codon)
- Notes:
- Has stop codon in insert
Originally Annotated References:
- Gene:
- IP6K2 (51447)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000492194
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001146178.2 | 79.3% | 79.3% | (many diffs) |
| 2 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001146179.3 | 79.3% | 79.3% | (many diffs) |
| 3 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_011533822.1 | 79.3% | 79.3% | (many diffs) |
| 4 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_011533823.1 | 79.3% | 79.3% | (many diffs) |
| 5 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001005910.3 | 71.1% | 71.1% | (many diffs) |
| 6 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001005911.3 | 71.1% | 71.1% | (many diffs) |
| 7 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006592.1 | 47.2% | 47.2% | (many diffs) |
| 8 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006593.1 | 47.2% | 47.2% | (many diffs) |
| 9 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006591.1 | 44.5% | 44.5% | (many diffs) |
| 10 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006589.1 | 44.2% | 44.2% | (many diffs) |
| 11 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006590.2 | 44.2% | 44.2% | (many diffs) |
| 12 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006588.1 | 37.6% | 37.5% | (many diffs) |
| 13 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001190316.1 | 37.4% | 37.2% | (many diffs) |
| 14 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001190317.1 | 36.8% | 36.7% | (many diffs) |
| 15 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_001005909.2 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 16 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NM_016291.4 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 17 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006583.2 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 18 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006584.2 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 19 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_017006585.2 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 20 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_024453568.1 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 21 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_024453569.1 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 22 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_024453570.1 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 23 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_024453571.1 | 16.3% | 16.1% | 205_207delGTG;210A>C;214_1278del |
| 24 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NR_027438.3 | 15.9% | 1_192del;403_1318del | |
| 25 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | NR_027437.3 | 15.8% | 1_195del;406_1321del | |
| 26 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_006713202.2 | 14.5% | 14.3% | (many diffs) |
| 27 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_011533816.2 | 14.5% | 14.3% | (many diffs) |
| 28 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_006713201.2 | 14.4% | 14.3% | (many diffs) |
| 29 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_006713200.1 | 14.3% | 14.2% | (many diffs) |
| 30 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XM_006713199.4 | 14.3% | 14.2% | (many diffs) |
| 31 | human | 51447 | IP6K2 | inositol hexakisphosphate k... | XR_001740172.1 | 11.9% | (many diffs) | |
| 32 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511856.3 | 65% | 66.3% | (many diffs) |
| 33 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511855.2 | 20.5% | 20.4% | (many diffs) |
| 34 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511853.2 | 18% | 17.9% | (many diffs) |
| 35 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511854.3 | 18% | 17.9% | (many diffs) |
| 36 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511852.2 | 15.1% | 15.2% | (many diffs) |
| 37 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | NM_029634.2 | 14.2% | 14.2% | (many diffs) |
| 38 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511850.2 | 14.2% | 14.2% | (many diffs) |
| 39 | mouse | 76500 | Ip6k2 | inositol hexaphosphate kina... | XM_006511851.3 | 14.2% | 14.2% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 209
- ORF end:
- 419
- ORF length:
- 210
- Sequence:
-
1 GAGTTTCCCC ACACTGAGTG GGTGGAGACT GAAGTTAGGC CAGCTTGGCA CTTGATGTAA 61 TTCTCCTTGG AATTTGCCCT TTTTGAGTTT GGATCTTGGT TCATTCTCAA GCCTCAGACA 121 GTGGTTCAAA GTTTTTTTCT TCCATTTCAG GTGTCGTGAG GCTAGCATCG ATTGATCAAC 181 AAGTTTGTAC AAAAAAGCAG GCTTCACCAT GAGCCCAGCC TTCAGGGCCA TGGATGTGGA 241 GCCCCGCGCC AAAGGCGTCC TTCTGGAGCC CTTTGTCCAC CAGGTCGGGG GGCACTCATG 301 CGTGCTCCGC TTCAATGAGA CAACCCTGTG CAAGCCCCTG GTCCCAAGGG AACATCAGTT 361 CTACGAGACC CTCCCTGCTG AGATGCGCAA ATTCACTCCC CAGTACAAAG GTGTCTCTTG 421 AGACCCAGCT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT 481 CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG 541 GCTTTATATA TCTTGTGGAA AGGACGAATC CTCCCCCCGG AGATAATCTA TACGCGTTAA 601 GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t