Construct: ORF ccsbBroad304_00073

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000202.1_s304c1, BRDN0000409509
Derived from:
ccsbBroadEn_00073
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANXA11 (311)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00073
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 311 ANXA11 annexin A11 NM_001157.3 100% 100%
2 human 311 ANXA11 annexin A11 NM_001278407.2 100% 100%
3 human 311 ANXA11 annexin A11 NM_001278408.1 100% 100%
4 human 311 ANXA11 annexin A11 NM_145868.2 100% 100%
5 human 311 ANXA11 annexin A11 NM_145869.2 100% 100%
6 human 311 ANXA11 annexin A11 XM_011539736.3 100% 100%
7 human 311 ANXA11 annexin A11 NM_001278409.2 93.4% 93.4% 0_1ins99
8 human 311 ANXA11 annexin A11 XM_005269742.1 91.4% 88% (many diffs)
9 human 311 ANXA11 annexin A11 XM_006717813.2 91.4% 88% (many diffs)
10 human 311 ANXA11 annexin A11 XM_005269741.4 82% 81.3% (many diffs)
11 mouse 11744 Anxa11 annexin A11 NM_013469.2 88.7% 92.8% (many diffs)
12 mouse 11744 Anxa11 annexin A11 XM_006518451.3 88.7% 92.8% (many diffs)
13 mouse 100039484 Gm2260 predicted gene 2260 XM_006519755.3 27.2% 28.7% (many diffs)
14 mouse 100039503 Gm2274 predicted gene 2274 XM_006519756.3 27.2% 28.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1581
ORF length:
1515
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag ctaccctggc tatcccccgc ccccaggtgg ctacccacca gctgcaccag
121gtggtggtcc ctggggaggt gctgcctacc ctcctccgcc cagcatgccc cccatcgggc
181tggataacgt ggccacctat gcggggcagt tcaaccagga ctatctctcg ggaatggcgg
241ccaacatgtc tgggacattt ggaggagcca acatgcccaa cctgtaccct ggggcccctg
301gggctggcta cccaccagtg ccccctggcg gctttgggca gcccccctct gcccagcagc
361ctgttcctcc ctatgggatg tatccacccc caggaggaaa cccaccctcc aggatgccct
421catatccgcc atacccaggg gcccctgtgc cgggccagcc catgccaccc cccggacagc
481agcccccagg ggcctaccct gggcagccac cagtgaccta ccctggtcag cctccagtgc
541cactccctgg gcagcagcag ccagtgccga gctacccagg atacccgggg tctgggactg
601tcacccccgc tgtgccccca acccagtttg gaagccgagg caccatcact gatgctcccg
661gctttgaccc cctgcgagat gccgaggtcc tgcggaaggc catgaaaggc ttcgggacgg
721atgagcaggc catcattgac tgcctgggga gtcgctccaa caagcagcgg cagcagatcc
781tactttcctt caagacggct tacggcaagg atttgatcaa agatctgaaa tctgaactgt
841caggaaactt tgagaagaca atcttggctc tgatgaagac cccagtcctc tttgacattt
901atgagataaa ggaagccatc aagggggttg gcactgatga agcctgcctg attgagatcc
961tcgcttcccg cagcaatgag cacatccgag aattaaacag agcctacaaa gcagaattca
1021aaaagaccct ggaagaggcc attcgaagcg acacatcagg gcacttccag cggctcctca
1081tctctctctc tcagggaaac cgtgatgaaa gcacaaacgt ggacatgtca ctcgcccaga
1141gagatgccca ggagctgtat gcggccgggg agaaccgcct gggaacagac gagtccaagt
1201tcaatgcggt tctgtgctcc cggagccggg cccacctggt agcagttttc aatgagtacc
1261agagaatgac aggccgggac attgagaaga gcatctgccg ggagatgtcc ggggacctgg
1321aggagggcat gctggccgtg gtgaaatgtc tcaagaatac cccagccttc tttgcggaga
1381ggctcaacaa ggccatgagg ggggcaggaa caaaggaccg gaccctgatt cgcatcatgg
1441tgtctcgcag cgagaccgac ctcctggaca tcagatcaga gtataagcgg atgtacggca
1501agtcgctgta ccacgacatc tcgggagata cttcagggga ttaccggaag attctgctga
1561agatctgtgg tggcaatgac tgcccaactt tcttgtacaa agtggttggt aagcctatcc
1621ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1681ttaagtcgac aatcaacctc tggatta

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