Construct: ORF ccsbBroad304_00652

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012991.1_s304c1, BRDN0000402387
Derived from:
ccsbBroadEn_00652
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GNAS (2778)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00652
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2778 GNAS GNAS complex locus NM_001077488.4 100% 100%
2 human 2778 GNAS GNAS complex locus NM_000516.6 99.7% 99.7% 256_257insGCA
3 human 2778 GNAS GNAS complex locus NM_080426.4 96.2% 95.9% 212_213ins45
4 human 2778 GNAS GNAS complex locus NM_001077489.4 95.9% 95.6% 212_213ins48
5 human 2778 GNAS GNAS complex locus XM_024451872.1 88.5% 88.1% (many diffs)
6 human 2778 GNAS GNAS complex locus NM_001309840.2 84.8% 84.8% 0_1ins177;79_80insGCA
7 human 2778 GNAS GNAS complex locus NM_001309861.2 84.8% 84.8% 0_1ins177;79_80insGCA
8 human 2778 GNAS GNAS complex locus XM_024451873.1 84.8% 84.8% 0_1ins177;79_80insGCA
9 human 2778 GNAS GNAS complex locus XM_024451874.1 84.8% 84.8% 0_1ins177;79_80insGCA
10 human 2778 GNAS GNAS complex locus XM_024451875.1 84.8% 84.8% 0_1ins177;79_80insGCA
11 human 2778 GNAS GNAS complex locus XM_017027815.1 84.7% 84.1% (many diffs)
12 human 2778 GNAS GNAS complex locus XM_017027817.1 81% 80.7% 0_1ins177;35_36ins48
13 human 2778 GNAS GNAS complex locus XM_017027818.2 81% 80.7% 0_1ins177;35_36ins48
14 human 2778 GNAS GNAS complex locus XM_017027819.1 81% 80.7% 0_1ins177;35_36ins48
15 human 2778 GNAS GNAS complex locus XM_017027816.1 80.2% 78.9% (many diffs)
16 human 2778 GNAS GNAS complex locus XM_017027820.1 80.2% 78.9% (many diffs)
17 human 2778 GNAS GNAS complex locus XR_002958471.1 52.5% (many diffs)
18 human 2778 GNAS GNAS complex locus XM_017027812.2 36.8% 36.1% (many diffs)
19 human 2778 GNAS GNAS complex locus NM_080425.3 36.8% 36% (many diffs)
20 human 2778 GNAS GNAS complex locus XM_017027813.2 35.4% 34.5% (many diffs)
21 human 2778 GNAS GNAS complex locus XM_017027814.2 35.3% 34.4% (many diffs)
22 human 2778 GNAS GNAS complex locus NM_001309842.2 21.7% 21.7% 258A>C;260_261delTAins926
23 mouse 14683 Gnas GNAS (guanine nucleotide bi... XM_006498774.1 94.9% 99.7% (many diffs)
24 mouse 14683 Gnas GNAS (guanine nucleotide bi... NM_001310083.1 94.7% 99.4% (many diffs)
25 mouse 14683 Gnas GNAS (guanine nucleotide bi... NM_201616.2 94.7% 99.4% (many diffs)
26 mouse 14683 Gnas GNAS (guanine nucleotide bi... NM_001077510.4 91.1% 95.6% (many diffs)
27 mouse 14683 Gnas GNAS (guanine nucleotide bi... XM_006498776.1 90.9% 95.4% (many diffs)
28 mouse 14683 Gnas GNAS (guanine nucleotide bi... XM_006498777.2 83.1% 87.7% (many diffs)
29 mouse 14683 Gnas GNAS (guanine nucleotide bi... XM_017315658.1 80.1% 84.5% (many diffs)
30 mouse 14683 Gnas GNAS (guanine nucleotide bi... XM_006498778.2 79.2% 83.4% (many diffs)
31 mouse 14683 Gnas GNAS (guanine nucleotide bi... NR_003258.1 64.6% (many diffs)
32 mouse 14683 Gnas GNAS (guanine nucleotide bi... NM_010309.4 31.9% 31.9% (many diffs)
33 mouse 14683 Gnas GNAS (guanine nucleotide bi... NM_001077507.2 30.6% 30.6% (many diffs)
34 mouse 14683 Gnas GNAS (guanine nucleotide bi... XM_006498780.1 30.6% 30.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1251
ORF length:
1185
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ctgcctcggg aacagtaaga ccgaggacca gcgcaacgag gagaaggcgc
121agcgtgaggc caacaaaaag atcgagaagc agctgcagaa ggacaagcag gtctaccggg
181ccacgcaccg cctgctgctg ctgggtgctg gagaatctgg taaaagcacc attgtgaagc
241agatgaggat cctgcatgtt aatgggttta atggagaggg cggcgaagag gacccgcagg
301ctgcaaggag caacagcgat ggcagtgaga aggcaaccaa agtgcaggac atcaaaaaca
361acctgaaaga ggcgattgaa accattgtgg ccgccatgag caacctggtg ccccccgtgg
421agctggccaa ccccgagaac cagttcagag tggactacat cctgagtgtg atgaacgtgc
481ctgactttga cttccctccc gaattctatg agcatgccaa ggctctgtgg gaggatgaag
541gagtgcgtgc ctgctacgaa cgctccaacg agtaccagct gattgactgt gcccagtact
601tcctggacaa gatcgacgtg atcaagcagg ctgactatgt gccgagcgat caggacctgc
661ttcgctgccg tgtcctgact tctggaatct ttgagaccaa gttccaggtg gacaaagtca
721acttccacat gtttgacgtg ggtggccagc gcgatgaacg ccgcaagtgg atccagtgct
781tcaacgatgt gactgccatc atcttcgtgg tggccagcag cagctacaac atggtcatcc
841gggaggacaa ccagaccaac cgcctgcagg aggctctgaa cctcttcaag agcatctgga
901acaacagatg gctgcgcacc atctctgtga tcctgttcct caacaagcaa gatctgctcg
961ctgagaaagt ccttgctggg aaatcgaaga ttgaggacta ctttccagaa tttgctcgct
1021acactactcc tgaggatgct actcccgagc ccggagagga cccacgcgtg acccgggcca
1081agtacttcat tcgagatgag tttctgagga tcagcactgc cagtggagat gggcgtcact
1141actgctaccc tcatttcacc tgcgctgtgg acactgagaa catccgccgt gtgttcaacg
1201actgccgtga catcattcag cgcatgcacc ttcgtcagta cgagctgctc tacccaactt
1261tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1321agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)