Construct: ORF ccsbBroad304_00978

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000034.1_s304c1, BRDN0000406018
Derived from:
ccsbBroadEn_00978
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAX (4149)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00978
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4149 MAX MYC associated factor X NM_002382.5 100% 100%
2 human 4149 MAX MYC associated factor X NM_145112.3 94.3% 94.3% 36_37ins27
3 human 4149 MAX MYC associated factor X XM_011536773.3 74.7% 61% (many diffs)
4 human 4149 MAX MYC associated factor X NM_145113.3 63.5% 61.2% (many diffs)
5 human 4149 MAX MYC associated factor X NM_001320415.2 52% 38.3% (many diffs)
6 human 4149 MAX MYC associated factor X XM_017021312.2 52% 38.3% (many diffs)
7 human 4149 MAX MYC associated factor X XM_017021313.1 52% 38.3% (many diffs)
8 human 4149 MAX MYC associated factor X NM_197957.3 47.6% 36.1% (many diffs)
9 human 4149 MAX MYC associated factor X NM_145114.2 45.9% 37.9% (many diffs)
10 human 4149 MAX MYC associated factor X NM_001271069.1 42% 30.6% (many diffs)
11 human 4149 MAX MYC associated factor X NM_001271068.1 40.7% 32.5% (many diffs)
12 human 4149 MAX MYC associated factor X NR_073137.1 23.2% (many diffs)
13 human 4149 MAX MYC associated factor X XR_943450.3 21.8% 1_202del;498_663del;849_2201del
14 human 4149 MAX MYC associated factor X XR_943451.3 21.6% 1_202del;497_678del;865_2217del
15 human 4149 MAX MYC associated factor X XR_001750327.2 21.3% (many diffs)
16 human 4149 MAX MYC associated factor X XR_943452.3 20.6% (many diffs)
17 human 4149 MAX MYC associated factor X XR_001750326.2 20.5% (many diffs)
18 human 4149 MAX MYC associated factor X XR_002957553.1 18.3% 1_193del;488_1072del;1259_2611del
19 mouse 17187 Max Max protein NM_008558.2 96% 99.3% (many diffs)
20 mouse 17187 Max Max protein NM_001146176.1 90.4% 93.7% (many diffs)
21 mouse 17187 Max Max protein XM_006515523.3 73.9% 76.8% (many diffs)
22 mouse 17187 Max Max protein XM_006515524.3 61.6% 61.2% (many diffs)
23 mouse 17187 Max Max protein XM_017314968.1 37.5% 38.9% (many diffs)
24 mouse 17187 Max Max protein XR_381483.3 21.1% (many diffs)
25 mouse 17187 Max Max protein XR_872708.2 20.9% (many diffs)
26 mouse 17187 Max Max protein XR_001780418.1 20.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
546
ORF length:
480
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag cgataacgat gacatcgagg tggagagcga cgaagagcaa ccgaggtttc
121aatctgcggc tgacaaacgg gctcatcata atgcactgga acgaaaacgt agggaccaca
181tcaaagacag ctttcacagt ttgcgggact cagtcccatc actccaagga gagaaggcat
241cccgggccca aatcctagac aaagccacag aatatatcca gtatatgcga aggaaaaacc
301acacacacca gcaagatatt gacgacctca agcggcagaa tgctcttctg gagcagcaag
361tccgtgcact ggagaaggcg aggtcaagtg cccaactgca gaccaactac ccctcctcag
421acaacagcct ctacaccaac gccaagggca gcaccatctc tgccttcgat gggggctcgg
481actccagctc ggagtctgag cctgaagagc cccaaagcag gaagaagctc cggatggagg
541ccagctaccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
601gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
661acctctggat ta

Download FASTA (ORF) (Full)