Construct: ORF ccsbBroad304_03283

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014260.1_s304c1, BRDN0000401177
Derived from:
ccsbBroadEn_03283
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RSRC1 (51319)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03283
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51319 RSRC1 arginine and serine rich co... NM_001271838.2 100% 100%
2 human 51319 RSRC1 arginine and serine rich co... NM_016625.3 100% 100%
3 human 51319 RSRC1 arginine and serine rich co... NM_001271834.1 82.6% 82.6% 319_320ins174
4 human 51319 RSRC1 arginine and serine rich co... XM_024453560.1 68.8% 63.7% (many diffs)
5 human 51319 RSRC1 arginine and serine rich co... XM_024453562.1 51.4% 46.7% (many diffs)
6 human 51319 RSRC1 arginine and serine rich co... XM_024453563.1 51.4% 46.7% (many diffs)
7 human 51319 RSRC1 arginine and serine rich co... XR_002959540.1 13.3% (many diffs)
8 mouse 66880 Rsrc1 arginine/serine-rich coiled... NM_025822.3 86.8% 91.9% (many diffs)
9 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319695.1 85.7% 90.8% (many diffs)
10 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319692.1 57% 60.4% (many diffs)
11 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319693.1 57% 60.4% (many diffs)
12 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319694.1 57% 60.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1068
ORF length:
1002
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg acgtcggtca tcagatactg aagaagaaag cagaagcaag agaaaaaaga
121aacaccgtag acggtcctcc tcgagcagtt cttcagatag tagaacatac agccgaaaga
181aaggaggaag gaaatcaaga tcaaagtcaa gatcttggtc cagagatctt cagcctcgtt
241cacattctta tgatagaaga cgcaggcatc gatcaagcag tagctcttct tatggctcca
301gaaggaaacg aagtcgaagt cgttcaaggg gtcgagggaa atcctataga gttcagaggt
361ctaggtcaaa aagcagaaca agaaggtcca ggtcaagacc tcgtctccgt tctcatagtc
421gtagcagtga aaggtccagt cacagaagaa cgcgtagtcg gtctcgggat agagaacgac
481gtaagggcag agataaagag aaaagagaaa aggagaagga taaagggaag gacaaggaat
541tacataacat caaacgtggg gaatctggaa acatcaaagc tggattagaa catctgccac
601cagctgaaca ggccaaagcc agactacagc tggttcttga agctgctgca aaagctgatg
661aagcattgaa agccaaagaa agaaatgagg aagaagcaaa gagaagaaag gaggaagacc
721aagccaccct ggtagaacaa gtaaaaagag taaaagaaat tgaagctatt gaaagtgatt
781cttttgttca gcagacattc agatcaagta aagaagtcaa aaagtcagtg gaacctagtg
841aagtgaaaca agcaacttca acatcaggac cagcatcagc agttgctgat ccacccagta
901ctgaaaaaga aatagatcct accagcatcc ctactgctat caagtaccaa gatgacaatt
961ccctggccca tccaaattta tttatcgaga aagctgatgc tgaggaaaaa tggttcaaga
1021gattaattgc tctccgacaa gaaagactaa tgggcagtcc tgtggcctac ccaactttct
1081tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1141aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)