Construct: ORF ccsbBroad304_03543

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011941.1_s304c1, BRDN0000404623
Derived from:
ccsbBroadEn_03543
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RMDN3 (55177)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03543
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55177 RMDN3 regulator of microtubule dy... NM_001304802.1 100% 100%
2 human 55177 RMDN3 regulator of microtubule dy... NM_001323894.1 100% 100%
3 human 55177 RMDN3 regulator of microtubule dy... NM_018145.3 100% 100%
4 human 55177 RMDN3 regulator of microtubule dy... NM_001323896.1 94.7% 94.7% 807_884del
5 human 55177 RMDN3 regulator of microtubule dy... NM_001323897.1 94.7% 94.7% 807_884del
6 human 55177 RMDN3 regulator of microtubule dy... NM_001323895.1 72.5% 72.5% 0_1ins387
7 human 55177 RMDN3 regulator of microtubule dy... XM_011521755.2 56.1% 56.1% 0_1ins618
8 mouse 67809 Rmdn3 regulator of microtubule dy... NM_001033136.3 83.9% 84.5% (many diffs)
9 mouse 67809 Rmdn3 regulator of microtubule dy... XR_866337.2 54.5% (many diffs)
10 mouse 67809 Rmdn3 regulator of microtubule dy... XR_374514.1 50% (many diffs)
11 mouse 67809 Rmdn3 regulator of microtubule dy... XR_001783170.1 40.1% (many diffs)
12 mouse 67809 Rmdn3 regulator of microtubule dy... XR_001783171.1 30.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1476
ORF length:
1410
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tagactggga gccctgggtg gtgcccgtgc cgggctggga ctgttgctgg
121gtaccgccgc cggccttgga ttcctgtgcc tcctttacag ccagcgatgg aaacggaccc
181agcgtcatgg ccgcagccag agcctgccca actccctgga ctatacgcag acttcagatc
241ccggacgcca cgtgatgctc ctgcgggctg tcccaggtgg ggctggagat gcctcagtgc
301tgcccagcct tccacgggaa ggacaggaga aggtgctgga ccgcctggac tttgtgctga
361ccagccttgt ggcgctgcgg cgggaggtgg aggagctgag aagcagcctg cgagggcttg
421cgggggagat tgttggggag gtccgatgcc acatggaaga gaaccagaga gtggctcggc
481ggcgaaggtt tccgtttgtc cgggagagga gtgactccac tggctccagc tctgtctact
541tcacggcctc ctcgggagcc acgttcacag atgctgagag tgaagggggt tacacaacag
601ccaatgcgga gtctgacaat gagcgggact ctgacaaaga aagtgaggac ggggaagatg
661aagtgagctg tgagactgtg aagatgggga gaaaggattc tcttgacttg gaggaagagg
721cagcttcagg tgcctccagt gccctggagg ctggaggttc ctcaggcttg gaggatgtgc
781tgcccctcct gcagcaggcc gacgagctgc acaggggtga tgagcaaggc aagcgggagg
841gcttccagct gctgctcaac aacaagctgg tgtatggaag ccggcaggac tttctctggc
901gcctggcccg agcctacagt gacatgtgtg agctcactga ggaggtgagc gagaagaagt
961catatgccct agatggaaaa gaagaagcag aggctgctct ggagaagggg gatgagagtg
1021ctgactgtca cctgtggtat gcggtgcttt gtggtcagct ggctgagcat gagagcatcc
1081agaggcgcat ccagagtggc tttagcttca aggagcatgt ggacaaagcc attgctctcc
1141agccagaaaa ccccatggct cactttcttc ttggcaggtg gtgctatcag gtctctcacc
1201tgagctggct agaaaaaaaa actgctacag ccttgcttga aagccctctc agtgccactg
1261tggaagatgc cctccagagc ttcctaaagg ctgaagaact acagccagga ttttccaaag
1321caggaagggt atatatttcc aagtgctaca gagaactagg gaaaaactct gaagctagat
1381ggtggatgaa gttggccctg gagctgccag atgtcacgaa ggaggatttg gctatccaga
1441aggacctgga agaactggaa gtcattttac gagactaccc aactttcttg tacaaagtgg
1501ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1561ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)