Construct: ORF ccsbBroad304_07017

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006109.1_s304c1, BRDN0000461523
Derived from:
ccsbBroadEn_07017
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SUOX (6821)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07017
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6821 SUOX sulfite oxidase NM_000456.3 99.9% 100% 1281G>C
2 human 6821 SUOX sulfite oxidase NM_001032386.2 99.9% 100% 1281G>C
3 human 6821 SUOX sulfite oxidase NM_001032387.2 99.9% 100% 1281G>C
4 human 6821 SUOX sulfite oxidase XM_017019907.2 99.9% 100% 1281G>C
5 human 6821 SUOX sulfite oxidase XM_017019908.1 99.9% 100% 1281G>C
6 human 6821 SUOX sulfite oxidase XM_017019905.2 98.6% 98.7% 1_21del;1302G>C
7 human 6821 SUOX sulfite oxidase XM_017019906.1 98.6% 98.7% 1_21del;1302G>C
8 human 6821 SUOX sulfite oxidase XM_024449167.1 98.6% 98.7% 1_21del;1302G>C
9 mouse 211389 Suox sulfite oxidase NM_173733.3 85.4% 85.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1704
ORF length:
1635
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gctgctgctg cacagagctg tggtcctcag gctccaacag gcctgcagac
121tcaagtcaat cccctcaagg atctgcattc aggcctgctc cacaaatgat tcatttcagc
181cccagcgccc cagcctcacc ttctctggtg ataactccag cacccaggga tggagagtca
241tggggaccct attaggtctc ggtgcagtgt tggcctatca ggaccatcgg tgtagggctg
301ctcaggagtc aacacacata tacactaagg aggaagtgag ttcccacacc agccctgaga
361ctgggatctg ggtgactctg ggctctgagg tctttgatgt cacagaattt gtggacctac
421atccaggggg gccttcaaag ctgatgctag cagctggggg tcccctagag cccttctggg
481ccctctatgc tgttcacaac cagtcccatg tgcgtgagtt actggctcag tacaagattg
541gggagctgaa tcctgaagac aaggtagccc ccaccgtgga gacctctgac ccttatgctg
601atgatcctgt acgtcaccca gccctgaagg tcaacagcca gcggcccttt aatgcagagc
661ctccccctga gctgctgaca gaaaactaca tcacacccaa ccctatcttc ttcacccgga
721accatctgcc tgtacctaac ctggatccag acacctatcg cttacacgta gtaggagcac
781ctgggggtca gtcactgtct ctttccctgg atgacttgca caactttccc aggtacgaga
841tcacagtcac tctgcagtgt gccggcaacc gacgctctga gatgactcag gtcaaagaag
901taaaaggtct ggagtggaga acaggagcca tcagcactgc acgctgggct ggggcacggc
961tctgtgatgt gttagcccag gctggccacc aactctgtga aactgaggcc cacgtctgct
1021ttgagggact ggactcagac cctactggga ctgcctatgg agcatccatc cctctggctc
1081gggccatgga ccctgaagct gaggtcctgc tggcatatga gatgaatggg cagcctctgc
1141cacgtgacca cggcttccct gtgcgtgtgg tggttcctgg agtggtgggt gcccgccatg
1201tcaaatggct gggcagagtg agtgtgcagc cagaggaaag ttacagccac tggcaacggc
1261gggattacaa aggcttctct ccatctgtgg actgggagac tgtagatttt gactctgctc
1321catccattca ggaacttcct gtccagtccg ccatcacaga gccccgggat ggagagactg
1381tagaatcagg ggaggtgacc atcaagggct atgcatggag tggtggtggc agggctgtga
1441tccgggtgga tgtgtctctg gatgggggcc taacctggca ggtggctaag ctggatggag
1501aggaacagcg ccccaggaag gcctgggcat ggcgtctgtg gcagttgaaa gcccctgtgc
1561cagctggaca aaaggaactg aacattgttt gtaaggctgt ggatgatggt tacaatgtgc
1621agccagacac cgtggcccca atctggaacc tgcgaggtgt tctcagcaat gcctggcatc
1681gtgtccatgt ctatgtctcc ccattgccaa ctttcttgta caaagtggtt ggtaagccta
1741tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
1801gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)