Construct: ORF ccsbBroad304_07541

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012722.1_s304c1, BRDN0000407955
Derived from:
ccsbBroadEn_07541
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FARSB (10056)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07541
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10056 FARSB phenylalanyl-tRNA synthetas... NM_005687.5 99.8% 99.8% 1653C>T;1753G>A
2 human 10056 FARSB phenylalanyl-tRNA synthetas... XM_006712169.2 83% 83% 0_1ins297;1356C>T;1456G>A
3 human 10056 FARSB phenylalanyl-tRNA synthetas... XM_011510466.2 83% 83% 0_1ins297;1356C>T;1456G>A
4 human 10056 FARSB phenylalanyl-tRNA synthetas... XM_017003110.2 83% 83% 0_1ins297;1356C>T;1456G>A
5 human 10056 FARSB phenylalanyl-tRNA synthetas... XM_024452492.1 83% 83% 0_1ins297;1356C>T;1456G>A
6 human 10056 FARSB phenylalanyl-tRNA synthetas... NR_130154.2 25.3% (many diffs)
7 mouse 23874 Farsb phenylalanyl-tRNA synthetas... NM_001278075.1 87.3% 93.7% (many diffs)
8 mouse 23874 Farsb phenylalanyl-tRNA synthetas... NM_011811.4 87.3% 93.7% (many diffs)
9 mouse 23874 Farsb phenylalanyl-tRNA synthetas... XR_865550.1 77.3% (many diffs)
10 mouse 23874 Farsb phenylalanyl-tRNA synthetas... NR_102758.1 65.6% (many diffs)
11 mouse 23874 Farsb phenylalanyl-tRNA synthetas... NR_102757.1 64.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1833
ORF length:
1767
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc gactgtcagc gtgaagcgtg atctgctctt ccaagccctg ggccgcacct
121acactgacga agaatttgat gaactatgtt ttgaatttgg tctggagctt gatgaaatta
181catctgagaa ggaaataata agtaaagaac aaggtaatgt aaaggcagca ggagcctctg
241atgttgttct ttacaaaatt gacgtccctg ccaatagata tgatctcctg tgtctggaag
301gattggttcg aggacttcag gtcttcaaag aaaggataaa ggctccagtg tataaacggg
361taatgcctga tggaaaaatc cagaaattga ttatcacaga agagacagct aagatacgtc
421cttttgcggt agcagcagtt ctccgtaata taaagtttac taaagatcga tatgacagct
481tcattgaact tcaggagaaa ttacatcaga atatttgcag gaaaagagca ctggttgcca
541ttggtaccca tgatttggac actttgtcgg gcccatttac ttatactgca aagcgtcctt
601cagatatcaa attcaagcct ctaaataaga ccaaggagta tacagcctgt gaactgatga
661acatatacaa gactgacaat cacctgaaac attatttaca tatcattgaa aacaaacccc
721tgtatccagt tatctatgat agcaatggtg tcgtcctttc aatgcctccc atcatcaatg
781gggatcattc cagaataaca gtaaatacta gaaatatttt tattgaatgc acgggaactg
841actttactaa ggcaaaaata gttcttgata ttattgtcac catgttcagt gaatattgtg
901agaatcaatt tacggtcgaa gctgctgaag tggtttttcc taatggaaaa tcacatacct
961ttccagaatt agcttaccga aaggagatgg tgagagctga cctaattaac aaaaaagttg
1021gaatcagaga aactccagaa aatcttgcca aacttctgac caggatgtat ttaaaatcag
1081aagtcatagg tgatgggaat cagattgaga ttgaaatccc tccaaccaga gctgacatta
1141tccatgcatg tgatattgta gaagatgcag ctattgctta tggatataac aacattcaga
1201tgactctccc gaaaacttac accatagcta atcaatttcc tcttaataag ctcactgaac
1261ttctccgaca tgacatggca gccgctggct tcactgaagc acttaccttt gccctgtgct
1321cccaagaaga tattgctgat aaactaggtg tggatatctc tgcaacaaag gcagtccaca
1381taagtaatcc taaaacagct gaatttcagg tggcacgcac tacccttctt cctggcctcc
1441tgaagaccat agcagcaaat cgtaagatgc cccttccact gaaactgttt gaaatctctg
1501acattgtaat aaaagattct aatacagatg taggtgcaaa aaactacaga catctctgtg
1561ctgtttatta caacaagaat cctgggtttg agatcattca tgggctgctg gacagaatta
1621tgcagttgct cgatgtgcct cctggtgaag acaagggggg atatgtgatc aaagcatcag
1681aagggcctgc tttcttcccc gggcgatgtg cagagatttt tgccaggggt caaagcgtcg
1741ggaagcttgg ggtccttcat cctgacgtta tcaccaaatt tgagctgacc atgccctgct
1801cctccctaga aatcaatatt ggaccctttt tgtgcccaac tttcttgtac aaagtggttg
1861gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1921accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)

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