Construct: ORF ccsbBroad304_08818

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004223.1_s304c1, BRDN0000411004
Derived from:
ccsbBroadEn_08818
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CXorf56 (63932)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08818
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 63932 CXorf56 chromosome X open reading f... NM_022101.4 99.8% 100% 375C>T
2 human 63932 CXorf56 chromosome X open reading f... NM_001170570.2 93.5% 93.6% 242_243ins42;333C>T
3 human 63932 CXorf56 chromosome X open reading f... NM_001170569.1 77.7% 77.9% 0_1ins147;228C>T
4 human 728024 LOC728024 chromosome X open reading f... NR_003671.2 43.1% (many diffs)
5 mouse 77644 C330007P06Rik RIKEN cDNA C330007P06 gene NM_029951.1 91.8% 99.5% (many diffs)
6 mouse 77644 C330007P06Rik RIKEN cDNA C330007P06 gene XM_006541410.3 83.3% 87.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
732
ORF length:
666
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc gaaagtagtg tctcggtcag tagtctgctc tgacactcgg gaccgggagg
121aatatgacga cggcgagaag cccctccatg tttactactg tttgtgcggc cagatggtcc
181tagtgctgga ctgccagtta gagaaattgc ccatgaggcc ccgggaccgg tcccgtgtga
241ttgatgctgc caaacatgcc cataagtttt gtaacacaga agatgaggag actatgtatc
301tgcggagacc tgaaggcatt gaacgacagt acaggaagaa atgtgcaaag tgtggactgc
361cgctcttcta ccaatcccag ccaaagaatg ctcctgttac cttcattgtg gatggagcag
421tagtcaagtt tggccagggt tttgggaaaa cgaacatata tactcagaaa caagagcctc
481ctaagaaggt gatgatgacc aaacggacca aagacatggg caagttcagt tctgtcaccg
541tgtctaccat tgatgaagag gaagaggaga ttgaggctag ggaagttgct gactcatatg
601cacagaatgc caaagtgatt gaaaaacagc tggagcgcaa aggcatgagc aagaggcgac
661tgcaagagct ggctgaattg gaagccaaga aagcgaaaat gaaggggacc ttgattgaca
721accagttcaa atacccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
781tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
841caatcaacct ctggatta

Download FASTA (ORF) (Full)