Construct: ORF ccsbBroad304_10209

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015900.1_s304c1, BRDN0000406487
Derived from:
ccsbBroadEn_10209
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BTN3A2 (11118)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10209
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197246.2 99.4% 99.4% 1_6delATGAAA
2 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197247.3 99.4% 99.4% 1_6delATGAAA
3 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_007047.5 99.4% 99.4% 1_6delATGAAA
4 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248827.4 99.4% 99.4% 1_6delATGAAA
5 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010211.1 99.4% 99.4% 1_6delATGAAA
6 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010212.1 99.4% 99.4% 1_6delATGAAA
7 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714979.4 97.9% 97.9% 1_6delATGAAA;710_724del
8 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714980.4 97.9% 97.9% 1_6delATGAAA;710_724del
9 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714981.4 97.9% 97.9% 1_6delATGAAA;710_724del
10 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514267.3 97.9% 97.9% 1_6delATGAAA;710_724del
11 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197248.2 90.9% 92.1% 0_1ins77;2_15del
12 human 11118 BTN3A2 butyrophilin subfamily 3 me... NM_001197249.2 87.9% 87.9% 0_1ins120
13 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010214.2 87.9% 87.9% 0_1ins120
14 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_006714982.4 86.6% 86.6% 0_1ins120;584_598del
15 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514269.3 86.6% 86.6% 0_1ins120;584_598del
16 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010213.2 86.6% 86.6% 0_1ins120;584_598del
17 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_194441.3 84.4% 77.8% (many diffs)
18 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_005248834.4 84.4% 77.8% (many diffs)
19 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248831.4 79.3% 79.3% 1_6delATGAAA;713_714ins201
20 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_005248832.4 79.3% 79.3% 1_6delATGAAA;713_714ins201
21 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_001145009.2 78.7% 72.4% (many diffs)
22 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514270.3 71.2% 71.2% 1_6delATGAAA;429_430ins282
23 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_011514271.2 71.2% 71.2% 1_6delATGAAA;429_430ins282
24 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010215.2 71.2% 71.2% 1_6delATGAAA;429_430ins282
25 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010216.2 67.7% 67.7% 0_1ins120;587_588ins201
26 human 11118 BTN3A2 butyrophilin subfamily 3 me... XM_017010217.2 59.6% 59.6% 0_1ins120;303_304ins282
27 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_005248833.2 59.6% 52.6% (many diffs)
28 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_007048.6 58.1% 53.4% (many diffs)
29 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_006994.5 54% 51.7% (many diffs)
30 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_001743130.1 50.6% (many diffs)
31 human 11119 BTN3A1 butyrophilin subfamily 3 me... NM_001145008.2 48.7% 44.2% (many diffs)
32 human 10384 BTN3A3 butyrophilin subfamily 3 me... NM_197974.3 46.4% 44.1% (many diffs)
33 human 11119 BTN3A1 butyrophilin subfamily 3 me... XM_006714983.3 41.1% 36.8% (many diffs)
34 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_001743132.1 27.6% (many diffs)
35 human 11119 BTN3A1 butyrophilin subfamily 3 me... XR_926039.3 24.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1062
ORF length:
996
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc aagttccctg gctttccttc tgctcaactt tcatgtctcc ctcctcttgg
121tccagctgct cactccttgc tcagctcagt tttctgtgct tggaccctct gggcccatcc
181tggccatggt gggtgaagac gctgatctgc cctgtcacct gttcccgacc atgagtgcag
241agaccatgga gctgaagtgg gtaagttcca gcctaaggca ggtggtgaac gtgtatgcag
301atggaaagga agtggaagac aggcagagtg caccgtatcg agggagaact tcgattctgc
361gggatggcat cactgcaggg aaggctgctc tccgaataca caacgtcaca gcctctgaca
421gtggaaagta cttgtgttat ttccaagatg gtgacttcta tgaaaaagcc ctggtggagc
481tgaaggttgc agcactgggt tctaatcttc acgtcgaagt gaagggttat gaggatggag
541ggatccatct ggagtgcagg tccaccggct ggtaccccca accccaaata cagtggagca
601acgccaaggg agagaacatc ccagctgtgg aagcacctgt ggttgcagat ggagtgggcc
661tatatgaagt agcagcatct gtgatcatga gaggcggctc cggggagggt gtatcctgca
721tcatcagaaa ttccctcctc ggcctggaaa agacagccag catttccatc gcagacccct
781tcttcaggag cgcccagccc tggatcgcag ccctggcagg gaccctgcct atcttgctgc
841tgcttctcgc cggagccagt tacttcttgt ggagacaaca gaaggaaata actgctctgt
901ccagtgagat agaaagtgag caagagatga aagaaatggg atatgctgca acagagcggg
961aaataagcct aagagagagc ctccaggagg aactcaagag gaaaaaaatc cagtacttga
1021ctcgtggaga ggagtcttcg tccgatacca ataagtcagc ctgcccaact ttcttgtaca
1081aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1141ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

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