Construct: ORF ccsbBroad304_10271
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF010582.1_s304c1, BRDN0000402655
- Derived from:
- ccsbBroadEn_10271
- DNA Barcode:
- None
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ANKRD36BP1 (84832)
Vector Information:
- Vector Backbone:
- pLX_304
- Pol II Cassette 1:
- PGK-BlastR
- Pol II Cassette 2:
- CMV-ccsbBroad304_10271
- Selection Marker:
- BlastR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 84832 | ANKRD36BP1 | ankyrin repeat domain 36B p... | NR_026844.1 | 18.9% | 1_385del;743_1879del | |
| 2 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_024453027.1 | 14% | 10.6% | (many diffs) |
| 3 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004592.2 | 13.3% | 10% | (many diffs) |
| 4 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004593.2 | 13.3% | 10% | (many diffs) |
| 5 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004594.2 | 13.3% | 10% | (many diffs) |
| 6 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004595.2 | 13.3% | 10% | (many diffs) |
| 7 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004590.2 | 10.7% | 8.1% | (many diffs) |
| 8 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004589.2 | 9.8% | 7.3% | (many diffs) |
| 9 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004588.2 | 9.7% | 7.3% | (many diffs) |
| 10 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004587.2 | 9.6% | 7.2% | (many diffs) |
| 11 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_024453026.1 | 9.6% | 7.2% | (many diffs) |
| 12 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004585.2 | 9.5% | 7.2% | (many diffs) |
| 13 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004584.2 | 8.6% | 6.5% | (many diffs) |
| 14 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XR_002959321.1 | 8.5% | (many diffs) | |
| 15 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004583.2 | 8.2% | 6.2% | (many diffs) |
| 16 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004579.2 | 8.1% | 6.1% | (many diffs) |
| 17 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004580.2 | 8.1% | 6.1% | (many diffs) |
| 18 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004581.2 | 8.1% | 6.1% | (many diffs) |
| 19 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004582.2 | 8.1% | 6.1% | (many diffs) |
| 20 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XR_001738869.2 | 8% | (many diffs) | |
| 21 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_017004578.2 | 7.9% | 6% | (many diffs) |
| 22 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | NM_025190.3 | 7.9% | 6% | (many diffs) |
| 23 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_005263995.5 | 7.9% | 6% | (many diffs) |
| 24 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XM_006712661.2 | 7.9% | 6% | (many diffs) |
| 25 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004050.1 | 7.8% | 5.9% | (many diffs) |
| 26 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004051.1 | 7.8% | 5.9% | (many diffs) |
| 27 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004049.1 | 7.4% | 5.5% | (many diffs) |
| 28 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004048.1 | 6.6% | 4.9% | (many diffs) |
| 29 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004047.1 | 6.5% | 4.9% | (many diffs) |
| 30 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004046.1 | 6.4% | 4.8% | (many diffs) |
| 31 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XR_001738871.1 | 6.2% | (many diffs) | |
| 32 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004044.1 | 6% | 4.5% | (many diffs) |
| 33 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004045.1 | 6% | 4.5% | (many diffs) |
| 34 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004039.1 | 5.9% | 4.5% | (many diffs) |
| 35 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004040.1 | 5.9% | 4.5% | (many diffs) |
| 36 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004041.1 | 5.9% | 4.5% | (many diffs) |
| 37 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004043.1 | 5.9% | 4.5% | (many diffs) |
| 38 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004025.1 | 5.8% | 4.4% | (many diffs) |
| 39 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004026.1 | 5.8% | 4.4% | (many diffs) |
| 40 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004027.1 | 5.8% | 4.4% | (many diffs) |
| 41 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004028.1 | 5.8% | 4.4% | (many diffs) |
| 42 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004030.1 | 5.8% | 4.4% | (many diffs) |
| 43 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004031.1 | 5.8% | 4.4% | (many diffs) |
| 44 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004032.1 | 5.8% | 4.4% | (many diffs) |
| 45 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004033.1 | 5.8% | 4.4% | (many diffs) |
| 46 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004034.1 | 5.8% | 4.4% | (many diffs) |
| 47 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004035.1 | 5.8% | 4.4% | (many diffs) |
| 48 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004036.1 | 5.8% | 4.4% | (many diffs) |
| 49 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004037.1 | 5.8% | 4.4% | (many diffs) |
| 50 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_024452877.1 | 5.8% | 4.4% | (many diffs) |
| 51 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004024.1 | 5.7% | 4.3% | (many diffs) |
| 52 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004011.1 | 5.7% | 4.3% | (many diffs) |
| 53 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004012.1 | 5.7% | 4.3% | (many diffs) |
| 54 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004013.1 | 5.7% | 4.3% | (many diffs) |
| 55 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004014.1 | 5.7% | 4.3% | (many diffs) |
| 56 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004015.1 | 5.7% | 4.3% | (many diffs) |
| 57 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004016.1 | 5.7% | 4.3% | (many diffs) |
| 58 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004017.1 | 5.7% | 4.3% | (many diffs) |
| 59 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004018.1 | 5.7% | 4.3% | (many diffs) |
| 60 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004019.1 | 5.7% | 4.3% | (many diffs) |
| 61 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004020.1 | 5.7% | 4.3% | (many diffs) |
| 62 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004021.1 | 5.7% | 4.3% | (many diffs) |
| 63 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004022.1 | 5.7% | 4.3% | (many diffs) |
| 64 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004023.1 | 5.7% | 4.3% | (many diffs) |
| 65 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004010.1 | 5.6% | 4.2% | (many diffs) |
| 66 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | NM_001354587.1 | 5.6% | 4.2% | (many diffs) |
| 67 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_006712514.3 | 5.6% | 4.2% | (many diffs) |
| 68 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XM_017004009.1 | 5.6% | 4.2% | (many diffs) |
| 69 | human | 57730 | ANKRD36B | ankyrin repeat domain 36B | XR_922976.2 | 5.5% | (many diffs) | |
| 70 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XR_002959292.1 | 5.2% | (many diffs) | |
| 71 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XR_002959293.1 | 4.9% | (many diffs) | |
| 72 | human | 400986 | ANKRD36C | ankyrin repeat domain 36C | NM_001310154.3 | 4.9% | 3.7% | (many diffs) |
| 73 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XR_002959294.1 | 3.5% | (many diffs) | |
| 74 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XR_922917.2 | 3.1% | (many diffs) | |
| 75 | human | 375248 | ANKRD36 | ankyrin repeat domain 36 | XR_001738739.2 | 2.9% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 423
- ORF length:
- 357
- Sequence:
-
1 ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag 61 ttggcatggg aacaagaact ctgcagtttg agatttctga tagtcatgaa aaagaagaag 121 acctgttgca taaaaaccat ttgatgcaag atgaaattgc caggctcagg ctggaaatac 181 acacaataaa aaatcaaatc ctggaaaaga aatacttaaa agacattgaa attataaaaa 241 gaaagcatga agaccttcaa aaggctctaa aacagaatgg ggaaaaatca acaaaaacga 301 tagcccatta tagtggacag cttactgctc tgacagatga gaacacaatg ctccgttcta 361 aactggagaa ggaaaaacaa agcaggcaaa gactgacgaa atggaatcat accatcgtag 421 actgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc 481 tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc 541 tctggatta