Construct: ORF ccsbBroad304_13034

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009400.1_s304c1, BRDN0000408345
Derived from:
ccsbBroadEn_13034
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LRRC37B (114659)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13034
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 114659 LRRC37B leucine rich repeat contain... NM_052888.3 94.6% 94.6% 1822_1974del
2 human 114659 LRRC37B leucine rich repeat contain... NM_001321350.2 85.9% 85.9% 0_1ins246;1576_1728del
3 human 374819 LRRC37A3 leucine rich repeat contain... NM_199340.4 44.1% 39% (many diffs)
4 human 474170 LRRC37A2 leucine rich repeat contain... XM_024450773.1 43.6% 39.1% (many diffs)
5 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524844.3 43.5% 38.6% (many diffs)
6 human 474170 LRRC37A2 leucine rich repeat contain... XM_024450774.1 43% 38.8% (many diffs)
7 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524841.3 42.8% 38% (many diffs)
8 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524842.3 42.8% 36.1% (many diffs)
9 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524843.3 42.4% 36.8% (many diffs)
10 human 9884 LRRC37A leucine rich repeat contain... NM_014834.4 42.3% 37.6% (many diffs)
11 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524850.3 42.3% 36.4% (many diffs)
12 human 474170 LRRC37A2 leucine rich repeat contain... NM_001006607.2 42.2% 37.5% (many diffs)
13 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524846.3 42.2% 37.4% (many diffs)
14 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524849.2 41.3% 37.3% (many diffs)
15 human 474170 LRRC37A2 leucine rich repeat contain... XM_024450775.1 41.3% 37.2% (many diffs)
16 human 474170 LRRC37A2 leucine rich repeat contain... XM_011524848.3 40.9% 36.1% (many diffs)
17 human 387646 LRRC37A6P leucine rich repeat contain... NR_003525.2 36.9% (many diffs)
18 human 55073 LRRC37A4P leucine rich repeat contain... XR_002958879.1 30% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2757
ORF length:
2688
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gtcttggctg cgtttctggg gcccatggcc cctccttacg tggcaactat
121tgtctttact agtcaaggag gctcagcctc tggtgtgggt caaggacccg ctccagctga
181cctctaaccc cctggggcca cctgagccct ggtcttcccg ctcctcccat ctcccatggg
241aatctcccca tgcacctgct cccccagcag ccccggggga ctttgattac ctggggccct
301ctgcttcttc gcagatgtca gccctgcctc aggaaccaac tgaaaatttg gctccattcc
361tgaaggaatt ggattcagct ggagagctgc ccctggggcc agagccgttc ttggctgcac
421atcaggactt aaatgacaag cggactccag aagaaaggct cccagaggtg gttccgcttc
481tcaaccggga tcagaaccag gccctagttc agcttcctcg cctcaagtgg gttcaaacta
541cagatctaga tcgggctgca ggtcatcagg cagatgaaat acttgttcca ctagacagta
601aggtttcaag accaaccaaa tttgttgttt cgcccaagaa cctgaagaaa gatctagctg
661aacgttggag ccttcctgag attgttggga ttccacacca attatccaaa cctcagcgtc
721agaaacagac tttgccagat gattatttga gtatggacac actgtatccc ggcagcctac
781ctccagaact ccgggtgaac gcagatgagc ctccagggcc tcctgagcaa gttggacttt
841ctcaattcca tctagagccc aaaagtcaaa atccagagac ccttgaagac atccagtcct
901cttcactcca ggaagaagcc ccagcgcagc ttctacagct ccctcaggag gtagaacctt
961caacccagca ggaggcccca gctctgcctc cagagtcctc tatggagagt ctagctcaaa
1021ctccactgaa tcatgaagtg acagttcaac ctccaggtga ggatcaagct cattataatt
1081tgcccaagtt tacagtcaaa cctgcagatg tggaggttac catgacttca gagcctaaaa
1141atgagacaga atctacccaa gcccagcagg aggccccaat tcagcctccc gaggaggcgg
1201aaccttcttc tacagccctg aggactacag atcctcctcc agaacaccct gaggtgacac
1261ttccaccttc agacaagggt caggctcagc attcacacct gactgaagcc acagttcaac
1321ctctggacct ggagcttagc ataactacag agcctactac agaggttaaa ccgtctccaa
1381ccacggagga aacctcagct cagcctccag acccggggct tgccataact ccagaaccca
1441ctacagagat tggacattcc acagccctgg agaagactag agctcctcat ccagaccagg
1501ttcagactct gcatcgaagc ctgactgaag tcacaggtcc acctacaaag ttagaatctt
1561cgcaggattc attggtgcag tctgaaactg caccagagga acagaaggcc tccacaagca
1621ccaacatatg tgagctctgc acctgcggag atgagactct gtcatgtgtt ggtctcagcc
1681caaagcagag gctccgccaa gtgcctgtgc cagagcccga cacctacaat ggcatcttca
1741ccaccttaaa tttccaagga aactatattt cataccttga tggaaatgta tggaaagcat
1801acagttggac cgagaaacta attctcagtg aaaattattt gactgaatta cctaaggatt
1861catttgaagg cctgctatac ctccagtatt taattctcaa tcgcaatcct ctgactactg
1921tcgaagatcc atatctcttt gaactgccgg cattaaaata tctagacatg ggaacaacac
1981acatcacact tacaacactt aagaacattc tcacgatgac tgttgaactg gaaaaactga
2041tcttacctag ccatatggcc tgctgcctct gccaatttaa aaatagcatt gaggctgtct
2101gcaagacagt caagctgcat tgcaacactg catgtctgac taacagcata cattgtcctg
2161aagaagcatc tgtagggaat ccagaaggag cgttcatgaa gatgttacaa gcccggaagc
2221agcacatgag cactcagctg actattgagt cggaggcgcc ctcagacagc agtggcatca
2281acttgtcagg ctttgggggt gatcagcttg aaattcagct aaccgagcag ctacggtccc
2341tcatccccaa cgaggatgtg agaaagttca tgtctcatgt tatccggacc ttgaaaatgg
2401aatgttcaga aacacatgtg caagggagct gtgccaagct catgttgcga acaggcctcc
2461tgatgaagct tctcagcgag cagcaggaag caaaggcatt gaatgtagaa tgggatacgg
2521accaacaaaa aacaaattat attaatgaga acatggaaca gaatgaacag aaagagcaga
2581agtcaagtga gctcatgaaa gaagttccag gagatgacta taagaacaaa ctcatcttcg
2641caatatctgt gactgtaata ctaataattt tgattataat tttttgtctt atagaggtga
2701attcacataa aagggcatca gaaaaataca aagacaaccc atcaatatca ggagccttgc
2761caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
2821ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
2881tta

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